| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623672
Identifier: 84623672
GI number: 84623672
Start: 2230723
End: 2232594
Strand: Direct
Name: 84623672
Synonym: XOO_2015
Alternate gene names: NA
Gene position: 2230723-2232594 (Clockwise)
Preceding gene: 84623671
Following gene: 84623682
Centisome position: 45.15
GC content: 65.17
Gene sequence:
>1872_bases GTGAGTCTGCGCTGGCGGTGCGGTTGGCTGCTGCTGGCCGCCTTGATCGCACCGCAGGCGCAGGCCGAACTGTTGGTCGA GTTTGTTGCGTCGGACTTGCGTCAGGCTGAGATCGAGGCGAGCAACGCACTGGTGCAGCAGGTTGCCCAGCGACTGCCGC AGGGCTGGACGCAGCGGCTGACCGCACCGATCCAGCTGCAATGGCGTACCGATCTGCCGGCGCAGGTACATGGCCGTGCA ATCGGCAATCGTGTCCTGCTCGATCGCGCGCTGCTGCAGGTGTGGAGTGCGCAGCCCGAAGATGCACGTGCCGATCGCAA CGCGCCAGCCACGCGCGCAGCGATGGCGGCGCTGATACACGAATTGGCGCATGTGCTCGATCGCGGTGCACATGGCGCTT TGTCGGGCGATCCGCGCCTGCGCGATCTTGCCGGTTGGCAGGTGCGGCCGTGGCGGGTGGGGCGCAGCGAAAATCAGTTC AGCCACCGCAGCCCGGACGAATACGAGCGCCGCAGCCCGGCCAAGTTTGTCGCGGTCAATCTTGAGCATTACGTACTGGA TGCCGACTATGCCTGCCGACGTCCCGCGCTGGCGGCCTGGTTTGCGCAGCGTATCGGTCCAACGCAGGGTGCTGTGCCAT GCGAGACCGCGCTGCCGTATCTGCAAGCCGACAACGATGCCGGTGCGATGTCGTTGCTGGCGCTGGATCCGGCACGCGTG TACGCGGTGGACTATCTGCTTGCCGAGGGCAACGAGCAGCCGATGAGCCGCTGGGGCCATAGCATGTTGCGGCTGGTGAT CTGTGCACCCGGCCGTGCACCGGGTCCGGCATGCCGGCTGGATCTGCAGTACCACCGCGTGCTGTCGTTCCGCGCGTTCG TGGGCGATGTGCAGATTTCCAGCTGGCGCGGGCTCACTGGCTCGTATCCATCGCGGCTGTTCGTGCTGCCGTTGAATCAG GTCGTCGACGAATACACCAAGGTGGAACTGCGTGCCTTGTCGTCGGTGCCGCTGACCCTGATGCCCGATGAGATCGCTGC GCTACTGACGCGTGCCGCGCAAGTGCATTGGAGCTACGACGGGCGCTATTACTTCATCGGCAATAACTGCGCGGTGGAAA CCTTCAAGTTGCTGCACGACGGGGTGCCACGTCTGGCTGCAGCCAAGTTGGCGTCGATCACGCCGCGCGGGGTGCGGCAA CGCTTGCAGCGCTCGGGTATCGCCGATACGCGGGTGCTGGACGATCCTGCTCAGGCGATCCGCCAGGGCTATTACTTCGA ATCGGCCGCTGCGCATTACCAGGCCATGTTCGATGTGCTTCGACGCGGTATCGCGGTGCCGCACACAACGGTTTCGCAGT GGCTGGATGCAGCGCCTGCCGCACGGGCGCAATGGTTCGACCGTGGTGGTCTGCGCGAAACTGCAGCGGCCTTGTTGCTG GAGCAGGCGGCATTGCGCCGTCGCGAACTGCTGGCGCGCGATGCGCTCAAGCGCCTGCTGCAACCGGGCGTGGTCGCGCG CGACACGGTGCAGGGACAGTTGCAATCGCTGTTCGCGCGTGAAGCCCAACTCAGCCATCCGGCGATGTTGTTGGGTGGTA CCGGCTACGGCGTGCCGCAGGCAGACGAGCAGCAACAGCTGAGCGCGCGCGTGGCGCAGGAAAGCGATGTGCTGATCAGT GGCTGGAAGCAGCTGCAGACGCTGGGACGCCAGCAGTTGCCGGCCGATCTGCGCATTGGATTGGAGCAGGGCAAGGCGAA TGTGGCGCATTTGCGTGCGCGCCTGCGCGTGCTTGCGAGCGGTGATGCGGCCGCCGACAAAGCGCAATCGGATATTCACA TCCCTATGCAGGCGCGACGAGTGCCTCAATGA
Upstream 100 bases:
>100_bases GCAGCGCGCGTCTGGAAGCGGCGCTGCTGCAGTTGCGTCGCCGTAGCGATGCGGCGCGGCTGTCCAGCGATCTGGAGTTG GCGCAGTCCATCCTGGCCCA
Downstream 100 bases:
>100_bases ACACTTGTTCCCAACACTGCTGCATGCGCGCACCGAAATCGAACAGTGGCGACGCGAGTACAACGAAGATCGGCCCAAGA AAGCAATTGGCGGTATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MSLRWRCGWLLLAALIAPQAQAELLVEFVASDLRQAEIEASNALVQQVAQRLPQGWTQRLTAPIQLQWRTDLPAQVHGRA IGNRVLLDRALLQVWSAQPEDARADRNAPATRAAMAALIHELAHVLDRGAHGALSGDPRLRDLAGWQVRPWRVGRSENQF SHRSPDEYERRSPAKFVAVNLEHYVLDADYACRRPALAAWFAQRIGPTQGAVPCETALPYLQADNDAGAMSLLALDPARV YAVDYLLAEGNEQPMSRWGHSMLRLVICAPGRAPGPACRLDLQYHRVLSFRAFVGDVQISSWRGLTGSYPSRLFVLPLNQ VVDEYTKVELRALSSVPLTLMPDEIAALLTRAAQVHWSYDGRYYFIGNNCAVETFKLLHDGVPRLAAAKLASITPRGVRQ RLQRSGIADTRVLDDPAQAIRQGYYFESAAAHYQAMFDVLRRGIAVPHTTVSQWLDAAPAARAQWFDRGGLRETAAALLL EQAALRRRELLARDALKRLLQPGVVARDTVQGQLQSLFAREAQLSHPAMLLGGTGYGVPQADEQQQLSARVAQESDVLIS GWKQLQTLGRQQLPADLRIGLEQGKANVAHLRARLRVLASGDAAADKAQSDIHIPMQARRVPQ
Sequences:
>Translated_623_residues MSLRWRCGWLLLAALIAPQAQAELLVEFVASDLRQAEIEASNALVQQVAQRLPQGWTQRLTAPIQLQWRTDLPAQVHGRA IGNRVLLDRALLQVWSAQPEDARADRNAPATRAAMAALIHELAHVLDRGAHGALSGDPRLRDLAGWQVRPWRVGRSENQF SHRSPDEYERRSPAKFVAVNLEHYVLDADYACRRPALAAWFAQRIGPTQGAVPCETALPYLQADNDAGAMSLLALDPARV YAVDYLLAEGNEQPMSRWGHSMLRLVICAPGRAPGPACRLDLQYHRVLSFRAFVGDVQISSWRGLTGSYPSRLFVLPLNQ VVDEYTKVELRALSSVPLTLMPDEIAALLTRAAQVHWSYDGRYYFIGNNCAVETFKLLHDGVPRLAAAKLASITPRGVRQ RLQRSGIADTRVLDDPAQAIRQGYYFESAAAHYQAMFDVLRRGIAVPHTTVSQWLDAAPAARAQWFDRGGLRETAAALLL EQAALRRRELLARDALKRLLQPGVVARDTVQGQLQSLFAREAQLSHPAMLLGGTGYGVPQADEQQQLSARVAQESDVLIS GWKQLQTLGRQQLPADLRIGLEQGKANVAHLRARLRVLASGDAAADKAQSDIHIPMQARRVPQ >Mature_622_residues SLRWRCGWLLLAALIAPQAQAELLVEFVASDLRQAEIEASNALVQQVAQRLPQGWTQRLTAPIQLQWRTDLPAQVHGRAI GNRVLLDRALLQVWSAQPEDARADRNAPATRAAMAALIHELAHVLDRGAHGALSGDPRLRDLAGWQVRPWRVGRSENQFS HRSPDEYERRSPAKFVAVNLEHYVLDADYACRRPALAAWFAQRIGPTQGAVPCETALPYLQADNDAGAMSLLALDPARVY AVDYLLAEGNEQPMSRWGHSMLRLVICAPGRAPGPACRLDLQYHRVLSFRAFVGDVQISSWRGLTGSYPSRLFVLPLNQV VDEYTKVELRALSSVPLTLMPDEIAALLTRAAQVHWSYDGRYYFIGNNCAVETFKLLHDGVPRLAAAKLASITPRGVRQR LQRSGIADTRVLDDPAQAIRQGYYFESAAAHYQAMFDVLRRGIAVPHTTVSQWLDAAPAARAQWFDRGGLRETAAALLLE QAALRRRELLARDALKRLLQPGVVARDTVQGQLQSLFAREAQLSHPAMLLGGTGYGVPQADEQQQLSARVAQESDVLISG WKQLQTLGRQQLPADLRIGLEQGKANVAHLRARLRVLASGDAAADKAQSDIHIPMQARRVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68928; Mature: 68796
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRWRCGWLLLAALIAPQAQAELLVEFVASDLRQAEIEASNALVQQVAQRLPQGWTQRL CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC TAPIQLQWRTDLPAQVHGRAIGNRVLLDRALLQVWSAQPEDARADRNAPATRAAMAALIH CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH ELAHVLDRGAHGALSGDPRLRDLAGWQVRPWRVGRSENQFSHRSPDEYERRSPAKFVAVN HHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEE LEHYVLDADYACRRPALAAWFAQRIGPTQGAVPCETALPYLQADNDAGAMSLLALDPARV HHHEEECCCHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCHHH YAVDYLLAEGNEQPMSRWGHSMLRLVICAPGRAPGPACRLDLQYHRVLSFRAFVGDVQIS HHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEE SWRGLTGSYPSRLFVLPLNQVVDEYTKVELRALSSVPLTLMPDEIAALLTRAAQVHWSYD CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHEEEEEC GRYYFIGNNCAVETFKLLHDGVPRLAAAKLASITPRGVRQRLQRSGIADTRVLDDPAQAI CEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHH RQGYYFESAAAHYQAMFDVLRRGIAVPHTTVSQWLDAAPAARAQWFDRGGLRETAAALLL HHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH EQAALRRRELLARDALKRLLQPGVVARDTVQGQLQSLFAREAQLSHPAMLLGGTGYGVPQ HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC ADEQQQLSARVAQESDVLISGWKQLQTLGRQQLPADLRIGLEQGKANVAHLRARLRVLAS CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC GDAAADKAQSDIHIPMQARRVPQ CCHHHHHCCCCCCCCHHHCCCCC >Mature Secondary Structure SLRWRCGWLLLAALIAPQAQAELLVEFVASDLRQAEIEASNALVQQVAQRLPQGWTQRL CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC TAPIQLQWRTDLPAQVHGRAIGNRVLLDRALLQVWSAQPEDARADRNAPATRAAMAALIH CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH ELAHVLDRGAHGALSGDPRLRDLAGWQVRPWRVGRSENQFSHRSPDEYERRSPAKFVAVN HHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEE LEHYVLDADYACRRPALAAWFAQRIGPTQGAVPCETALPYLQADNDAGAMSLLALDPARV HHHEEECCCHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCHHH YAVDYLLAEGNEQPMSRWGHSMLRLVICAPGRAPGPACRLDLQYHRVLSFRAFVGDVQIS HHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEE SWRGLTGSYPSRLFVLPLNQVVDEYTKVELRALSSVPLTLMPDEIAALLTRAAQVHWSYD CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHEEEEEC GRYYFIGNNCAVETFKLLHDGVPRLAAAKLASITPRGVRQRLQRSGIADTRVLDDPAQAI CEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHH RQGYYFESAAAHYQAMFDVLRRGIAVPHTTVSQWLDAAPAARAQWFDRGGLRETAAALLL HHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH EQAALRRRELLARDALKRLLQPGVVARDTVQGQLQSLFAREAQLSHPAMLLGGTGYGVPQ HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC ADEQQQLSARVAQESDVLISGWKQLQTLGRQQLPADLRIGLEQGKANVAHLRARLRVLAS CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC GDAAADKAQSDIHIPMQARRVPQ CCHHHHHCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA