| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623621
Identifier: 84623621
GI number: 84623621
Start: 2170619
End: 2170966
Strand: Direct
Name: 84623621
Synonym: XOO_1964
Alternate gene names: NA
Gene position: 2170619-2170966 (Clockwise)
Preceding gene: 84623620
Following gene: 84623622
Centisome position: 43.94
GC content: 51.15
Gene sequence:
>348_bases GTGACACCAGATGAACGCAGAGCCTATGCGCAAACAATGTTTGCGCAGCACCCAGAGTTATTTCCGGATGATCGGCGGCA GTCGATATTAAACGGGGTTATAGAGATCGGCATGACGCCATTTGAGGCCAGATTGGCGGGCGGGGCTTTCGCGTACAAGG TAGTCGCTGACAAAGCAAGGTGGCCCGAGAATGCTGACCCTCTCAAAGTAATGTGGGCGCAATCCATGCAGGCTGACGAT AGTGAGATTTGGATGATGTTCAAGAATTCATCGCAGTACCCTGGTGACAGCGACACCTCCTTTCGTGTCTATTTTGAGCG AGGTGGCGCGATAAAATTGAGAAATTAG
Upstream 100 bases:
>100_bases GGTGAGATCGAGAGCCTCAACGTATCGGTTGCGACCGGCGTGACCTTGTTCGAAGTCGTACGCCAGCGCTTGGAGCAAGT TAGCCAACAGGAGGTTTGAA
Downstream 100 bases:
>100_bases AAGGAGATAAACTTTGAAGTCAAAAAATTGGTCCCCTATTTTTTATTTGCTGTTTGCTTTTGCGCTTGCCTCGCTCGGAT TGACTTCATGCGCCAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTPDERRAYAQTMFAQHPELFPDDRRQSILNGVIEIGMTPFEARLAGGAFAYKVVADKARWPENADPLKVMWAQSMQADD SEIWMMFKNSSQYPGDSDTSFRVYFERGGAIKLRN
Sequences:
>Translated_115_residues MTPDERRAYAQTMFAQHPELFPDDRRQSILNGVIEIGMTPFEARLAGGAFAYKVVADKARWPENADPLKVMWAQSMQADD SEIWMMFKNSSQYPGDSDTSFRVYFERGGAIKLRN >Mature_114_residues TPDERRAYAQTMFAQHPELFPDDRRQSILNGVIEIGMTPFEARLAGGAFAYKVVADKARWPENADPLKVMWAQSMQADDS EIWMMFKNSSQYPGDSDTSFRVYFERGGAIKLRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13171; Mature: 13040
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDERRAYAQTMFAQHPELFPDDRRQSILNGVIEIGMTPFEARLAGGAFAYKVVADKAR CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCCC WPENADPLKVMWAQSMQADDSEIWMMFKNSSQYPGDSDTSFRVYFERGGAIKLRN CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEECC >Mature Secondary Structure TPDERRAYAQTMFAQHPELFPDDRRQSILNGVIEIGMTPFEARLAGGAFAYKVVADKAR CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCCC WPENADPLKVMWAQSMQADDSEIWMMFKNSSQYPGDSDTSFRVYFERGGAIKLRN CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA