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The map label for this gene is yoaB [C]

Identifier: 84623465

GI number: 84623465

Start: 1994000

End: 1994347

Strand: Direct

Name: yoaB [C]

Synonym: XOO_1808

Alternate gene names: 84623465

Gene position: 1994000-1994347 (Clockwise)

Preceding gene: 84623464

Following gene: 84623477

Centisome position: 40.36

GC content: 63.79

Gene sequence:

>348_bases
ATGGTGCAGCGATTCGATGCGGGTCCGCGGATGTCCGAAATGACCGTCCATGCTGGCGTGTGCTATCTGGCCGGCCAGAT
TGCCGATGACACCAGCCAAGACATCACCGGTCAGACCCGCCAGGTGCTGGGCGAGATCGACAAGCTGCTGGCGCTGGCGG
CCAGCGACAAGACCAAGATTCTGCGGGCAGAAATCTTTCTCGCCGACATCGCCGATTTCGATGGCATGAACAAGGCCTGG
GACGCGTGGGTGCCGCACGGCTTCACGCCTGCCCGCGCCACCGTCGAAGCCACGTTGGCGCGACCGGAGTGGAAGGTGGA
AATCGTTGTCACCGCTGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
CGGGCGGGCACCGTGTTGGCGCGCTGCGTGCGCAACGGGGCTGCATGCGTGCCGCATTCGCGGGACAATGCGGGCGTCAA
TCAACCGTAGGAAGTCAGAA

Downstream 100 bases:

>100_bases
TCGCACTACCGAGAAAGCGATCAGCATGCGGTGCGCGCGATTGCACGCACCGGCATCATGGCGACCGAGTGACTGCTGCG
CAGCTGTCACGGCTGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MVQRFDAGPRMSEMTVHAGVCYLAGQIADDTSQDITGQTRQVLGEIDKLLALAASDKTKILRAEIFLADIADFDGMNKAW
DAWVPHGFTPARATVEATLARPEWKVEIVVTAAAG

Sequences:

>Translated_115_residues
MVQRFDAGPRMSEMTVHAGVCYLAGQIADDTSQDITGQTRQVLGEIDKLLALAASDKTKILRAEIFLADIADFDGMNKAW
DAWVPHGFTPARATVEATLARPEWKVEIVVTAAAG
>Mature_115_residues
MVQRFDAGPRMSEMTVHAGVCYLAGQIADDTSQDITGQTRQVLGEIDKLLALAASDKTKILRAEIFLADIADFDGMNKAW
DAWVPHGFTPARATVEATLARPEWKVEIVVTAAAG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=112, Percent_Identity=44.6428571428571, Blast_Score=95, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12445; Mature: 12445

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRFDAGPRMSEMTVHAGVCYLAGQIADDTSQDITGQTRQVLGEIDKLLALAASDKTKI
CCCCCCCCCCCCCEEEHHHHEEHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
LRAEIFLADIADFDGMNKAWDAWVPHGFTPARATVEATLARPEWKVEIVVTAAAG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEEEEECCC
>Mature Secondary Structure
MVQRFDAGPRMSEMTVHAGVCYLAGQIADDTSQDITGQTRQVLGEIDKLLALAASDKTKI
CCCCCCCCCCCCCEEEHHHHEEHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
LRAEIFLADIADFDGMNKAWDAWVPHGFTPARATVEATLARPEWKVEIVVTAAAG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA