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The map label for this gene is 84623459

Identifier: 84623459

GI number: 84623459

Start: 1987646

End: 1989016

Strand: Direct

Name: 84623459

Synonym: XOO_1802

Alternate gene names: NA

Gene position: 1987646-1989016 (Clockwise)

Preceding gene: 84623458

Following gene: 84623463

Centisome position: 40.23

GC content: 66.96

Gene sequence:

>1371_bases
ATGCGACGACTTGAAATGTGGAGCGCGCTCTGCGGCGCGGCGATGTTGACGCTGTCGGGCATGGCCGCCGCGCAGGCGCC
GGAACCGCTCAGCCATGGCCGGTTCGAGCAGGTGCCGGTGCTGATGCCCAAGGGCGAGCCGCAACGGGTGGTGATCTGGC
TGGCCGGTGCCGGCAATGCCGCCGGGCGCCAGGCCCAGGCGGAAAGCCTGCGGGCCGACGGTGCGATGGTTGCGGTGGTG
GATACCGCGCACCTGTACGCGGTGCTGCGAAAGGCCGGCGGTACCTGCACGTTCTCGGTTGGCGATGTGGAAAACTTCTC
ACGCTACATGCAGGCCTTCTATCACATCCCCACCTACCGCCTGCCGCTGCTGGTGGGCGATGGCGAGGGCGCGGCGCTGG
CCTACGCGATCGCTGCGCAATCCAGACCGCATGTGCTGGCCGGTGTGCTGACCGACGGGCTGTGCCCAGCCAACGTGTCC
AACCAGGCGATCTGCCAACCGGGTGTCAGCCCGGGCACCAACACGCTGTTGCCGGTGCCGTTGCAGATTCCCTGGGTGCT
TGCCGCCAGCCAGGACAAACACTGCCCCGCAGCTGCCGAAGAGGGTTTCCTCAAGCAGGTGCCGCAGGCGCGCACCTTCC
GACGGTCTGCAAAAGGCGACATCCTGCCCGGCCTGCGCGCCGCGGCCCGCTCGCTGGGCGAGCAGAAAGGCGTGGCATTG
CCGCCGCCGCCGGGCGGTCTGGCCGACCTGCCGGTGGTGGAACTGCCGGCCAAGCCTGACGGCGACAGCGACGACGACAC
CTTCGTGATCTTCGTCTCCGGCGATGGCGGTTGGGCCGGCCTTGACGAAGAAGTCGCCGACGCAATCGCGGCGCAAGGCA
TTCCGGTGGTCGGCCTGGATTCGCTGCGTTACTTCTGGACCGAGCGCACGCCGCAAGGTTTTGCCGACGACCTGGATCGC
ATTGCCCGCATCTATGCGCAGCGATGGGATCGTCGGCGCGTGGTGCTGATCGGCTTCTCGCAGGGCGCGGATGTGCTGCC
GGCCGCCATCAACAAACTGCCCGCTGCGACCAAGCAGAACCTGCGCATGACGGCACTGTTGTCGGTCGGCAAGCTGGCCG
ACTACGAGTTCCACGTCAGCAACTGGCTGGGCTCGGACGACGAAGGTCTGCCGATCGCGCCGGAAGTACAGCGTTTGCCG
GCGGGTACCACGGTGTGCATCTACGGCCAGGACGACGACGACGCGCTCTGCCAGAGCCTGCCTGCAAATGTGGCCAAGCG
GGTCGCACTGCCAGGCGATCACCATTTCAAGGGCGACTACGCGACCTTGGCCAAGACCATCATGGACCAGATGCACGCGC
TGTCGAAGTAA

Upstream 100 bases:

>100_bases
GCCGGTTGTCAGCGGGCCAAAGGCGCAATGAGCGAAGTCCTGCACTTCGCGTTGCCGCCTAGAACGATTATCTTTGAACC
ACTTTTCCCGATGGTGCGAC

Downstream 100 bases:

>100_bases
GGCGCGCAACGCCGGTTGTTCTGATGCGCGCGCCGACGTGTCGATGTCGGCGTCTCGACTCTGTACGTCGCTGCCGAGGG
CGATATACAGAAGTCCGATC

Product: virulence protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPLSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAAGRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYMQAFYHIPTYRLPLLVGDGEGAALAYAIAAQSRPHVLAGVLTDGLCPANVS
NQAICQPGVSPGTNTLLPVPLQIPWVLAASQDKHCPAAAEEGFLKQVPQARTFRRSAKGDILPGLRAAARSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADAIAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRRRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCQSLPANVAKRVALPGDHHFKGDYATLAKTIMDQMHALSK

Sequences:

>Translated_456_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPLSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAAGRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYMQAFYHIPTYRLPLLVGDGEGAALAYAIAAQSRPHVLAGVLTDGLCPANVS
NQAICQPGVSPGTNTLLPVPLQIPWVLAASQDKHCPAAAEEGFLKQVPQARTFRRSAKGDILPGLRAAARSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADAIAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRRRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCQSLPANVAKRVALPGDHHFKGDYATLAKTIMDQMHALSK
>Mature_456_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPLSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAAGRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYMQAFYHIPTYRLPLLVGDGEGAALAYAIAAQSRPHVLAGVLTDGLCPANVS
NQAICQPGVSPGTNTLLPVPLQIPWVLAASQDKHCPAAAEEGFLKQVPQARTFRRSAKGDILPGLRAAARSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADAIAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRRRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCQSLPANVAKRVALPGDHHFKGDYATLAKTIMDQMHALSK

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48495; Mature: 48495

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLEMWSALCGAAMLTLSGMAAAQAPEPLSHGRFEQVPVLMPKGEPQRVVIWLAGAGNA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCC
AGRQAQAESLRADGAMVAVVDTAHLYAVLRKAGGTCTFSVGDVENFSRYMQAFYHIPTYR
CCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEE
LPLLVGDGEGAALAYAIAAQSRPHVLAGVLTDGLCPANVSNQAICQPGVSPGTNTLLPVP
EEEEEECCCCCEEEEEEECCCCCCEEEHHHHCCCCCCCCCCCCEECCCCCCCCCCEEECC
LQIPWVLAASQDKHCPAAAEEGFLKQVPQARTFRRSAKGDILPGLRAAARSLGEQKGVAL
CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADAIAAQGIPVVGLD
CCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEHH
SLRYFWTERTPQGFADDLDRIARIYAQRWDRRRVVLIGFSQGADVLPAAINKLPAATKQN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHCC
LRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLPAGTTVCIYGQDDDDALCQSL
CEEEEHHHHCCCCCCEEEHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHC
PANVAKRVALPGDHHFKGDYATLAKTIMDQMHALSK
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRLEMWSALCGAAMLTLSGMAAAQAPEPLSHGRFEQVPVLMPKGEPQRVVIWLAGAGNA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCC
AGRQAQAESLRADGAMVAVVDTAHLYAVLRKAGGTCTFSVGDVENFSRYMQAFYHIPTYR
CCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEE
LPLLVGDGEGAALAYAIAAQSRPHVLAGVLTDGLCPANVSNQAICQPGVSPGTNTLLPVP
EEEEEECCCCCEEEEEEECCCCCCEEEHHHHCCCCCCCCCCCCEECCCCCCCCCCEEECC
LQIPWVLAASQDKHCPAAAEEGFLKQVPQARTFRRSAKGDILPGLRAAARSLGEQKGVAL
CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADAIAAQGIPVVGLD
CCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEHH
SLRYFWTERTPQGFADDLDRIARIYAQRWDRRRVVLIGFSQGADVLPAAINKLPAATKQN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHCC
LRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLPAGTTVCIYGQDDDDALCQSL
CEEEEHHHHCCCCCCEEEHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHC
PANVAKRVALPGDHHFKGDYATLAKTIMDQMHALSK
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA