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The map label for this gene is 84623418

Identifier: 84623418

GI number: 84623418

Start: 1946057

End: 1947634

Strand: Direct

Name: 84623418

Synonym: XOO_1761

Alternate gene names: NA

Gene position: 1946057-1947634 (Clockwise)

Preceding gene: 84623417

Following gene: 84623419

Centisome position: 39.39

GC content: 64.89

Gene sequence:

>1578_bases
ATGCATGATTCCAGCGCGCCCACAGCGCAGACCACCCAGCAAAGGCCGGCCCATACGCTGCGTCTGATTCTGGGCGACCA
GCTCAATCCACAACACAGCTGGTTTGCGACGCGCGATGCGGGCGTGGTCTATGTGTTGATGGAAGTGCGGCAGGAAACCG
ACTACGTGCTGCATCACGCGCAGAAGGTCCTGGCGATCTTCGCGGCCATGCGTGCCTTCGCTGCAGGTTTGCGGCGGGAC
GGGCATCGGGTGCGCTATGTGACGATCGACAATGCCAGCAACCGGCAGTCGATCCCGCACAACCTCGAGGCGTTGATGGC
GCATTACCGGGCCGACCGGTTGGACTACCAGGCCCCGGACGAGTGGCGGCTGGACGAAGCGCTGCAGCACTGGAGCGCGG
CGCAGCCCTTTGCCACGCGCATGCTCGACAGCGAACATTTTCTGACCGCGCGCAATGAAGTCGCCGCCTGTTTTCGCGCC
GGCAGCCCGTGGCGCATGGACGTGTTTTATCGGCGCATGCGGCGCCAGCATCGGATCCTGCTCGATGCCGCCGGCGAACC
GGAAGGCGGGCGCTGGAACTTCGATCACGACAATCGTGCGCCGTGGCCGGGCGACCCACCTGCGCCACGGGATTGGCGCG
CAACGCACGATCACAGCGCGCTGTGGCGCACGATCGAAGCCGCCGGCGTGCGCAGTTTTGGCGCGCCGAATGCGCAAGCT
CTGCCATGGCCGGTCGATCGCGAGGAAGCCTTGCAGCATCTGGATGCATTCATCGCAGACGCCTTGCCGGATTTCGGCCG
CTACGAAGATGCGATGAGCACGCGCAGCCCGCGCCTGTTTCATTCGCTGCTGTCGTTTGCGCTCAACGTCAAGATGCTGC
ATCCGCGCGAAGTGATCGCGCGTGCCGAAGCGGCATGGCGGCAAGGGCATGCGCCGTTGGCGGCGGTGGAAGGCTTCATC
CGCCAGATTCTGGGGTGGCGCGAATACGTGCGCGGTGTGTACTGGTCGCAGATGCCCGGCTACGCGGATTTGAATCACCT
CGATCAGCATGCACCGCTGCCGCACTGGTTCTGGGATGGGCAGATCGGCATGCGCTGCCTGGCCGATGCGGTCGGTAATT
CGCTGGCCAACGCGCATGCGCATCACATCCAGCGGCTGATGGTGATCGGCAATTTTGCGCTGCTGGCGGGGCTGGACCCG
CAGGCGCTGCATCGCTGGTACTTGGGCGTGTACATCGACGCCTTCGAGTGGGTGGAGCTGCCCAATACGGTCGGCATGAG
TCAGTTCGCCGATGGTGGCCTGCTGGGCAGCAAGCCGTATATCAGCGGCGCGGCCTATGTCGATCGCATGAGCGATTACT
GCAGTGGCTGCCGGTACCAGCGCAAGCTGCGGGTCGGCGCGAACGCGTGCCCGTACAACGCGTTGTACTGGGATTTCCTG
CAGCGCCAGCGTCCGCTGTTGGGCGCCAACGAACGCCTGGCACTGCCGTATCGCCAGCTCGATGGCATGGCCCCCGAGGT
GTTGGCTGAGGTGCAGGCCCAGGCCGCGCATTGGCGGTCCCATCTCGAGGCACTGTGA

Upstream 100 bases:

>100_bases
CAGTGGGCGCGGGGGCAAGCCAGTCCGGTCGAGTGCGTGTCGAGGTGATGAAGCCAGCATGCGCGCGCCTGTGTATCGAG
CCTGATCGAGCGCCACGCTG

Downstream 100 bases:

>100_bases
GCCTTCCCGCAGTGGCCGAAAGGACGCGCAGCTGAATGCGCGATCTGACGCTGCCACGCGCATCTGCGACAATGCTGCGC
TGCGCCACCAAGGCGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MHDSSAPTAQTTQQRPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHAQKVLAIFAAMRAFAAGLRRD
GHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPDEWRLDEALQHWSAAQPFATRMLDSEHFLTARNEVAACFRA
GSPWRMDVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRATHDHSALWRTIEAAGVRSFGAPNAQA
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYVDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL

Sequences:

>Translated_525_residues
MHDSSAPTAQTTQQRPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHAQKVLAIFAAMRAFAAGLRRD
GHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPDEWRLDEALQHWSAAQPFATRMLDSEHFLTARNEVAACFRA
GSPWRMDVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRATHDHSALWRTIEAAGVRSFGAPNAQA
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYVDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL
>Mature_525_residues
MHDSSAPTAQTTQQRPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHAQKVLAIFAAMRAFAAGLRRD
GHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPDEWRLDEALQHWSAAQPFATRMLDSEHFLTARNEVAACFRA
GSPWRMDVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRATHDHSALWRTIEAAGVRSFGAPNAQA
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYVDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59800; Mature: 59800

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSSAPTAQTTQQRPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHA
CCCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHH
QKVLAIFAAMRAFAAGLRRDGHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EWRLDEALQHWSAAQPFATRMLDSEHFLTARNEVAACFRAGSPWRMDVFYRRMRRQHRIL
CCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEE
LDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRATHDHSALWRTIEAAGVRSFGAPNAQA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIA
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEECHHHHHH
RAEAAWRQGHAPLAAVEGFIRQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECC
QIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDPQALHRWYLGVYIDAFEWVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PNTVGMSQFADGGLLGSKPYISGAAYVDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHH
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL
HHCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDSSAPTAQTTQQRPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHA
CCCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHH
QKVLAIFAAMRAFAAGLRRDGHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EWRLDEALQHWSAAQPFATRMLDSEHFLTARNEVAACFRAGSPWRMDVFYRRMRRQHRIL
CCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEE
LDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRATHDHSALWRTIEAAGVRSFGAPNAQA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIA
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEECHHHHHH
RAEAAWRQGHAPLAAVEGFIRQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECC
QIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDPQALHRWYLGVYIDAFEWVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PNTVGMSQFADGGLLGSKPYISGAAYVDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHH
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL
HHCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA