Click here to switch to the map view.

The map label for this gene is 84623415

Identifier: 84623415

GI number: 84623415

Start: 1942646

End: 1944022

Strand: Direct

Name: 84623415

Synonym: XOO_1758

Alternate gene names: NA

Gene position: 1942646-1944022 (Clockwise)

Preceding gene: 84623413

Following gene: 84623416

Centisome position: 39.32

GC content: 62.89

Gene sequence:

>1377_bases
ATGCGGACACGCCGTCCTGCTGCCGAGCAATTGCATGCCGATGAGCTGTTTCGTTCGCGTCTGGAGAACCAGATCGACGT
GCGCCATCCACTGGTCCAGCTGAGCCATCGGCTGCCGTGGAGTGCGTTGGAGCAGGCGCTGTCGCCGCGGTTGCCGGCCA
CCACCAGCACAGGCGGTCGACCCGCATTGCCGGTGCGTCTGATCGCTGGGCTGCTCTACCTCAAGCACGCCTACGACCTG
TCCGACGAGGCGGTCTGCGAACGTTGGCTGGAAAATCCGTACTGGCAGTTCTTCACCGGCGAGGTGGTGTTCCAGACCTG
CTTGCCGTGCGATCCCAGCTCCCTGACCCGTTGGCGACAGCGTCTGGGCGAAGCCGGTATGGAAGAGCTGTTGGCGCATA
CGATCAACACCGCTCACGCGATGAAGGCGGTGGACACACGCGAGTTGTCGCGGGTGATCGTGGATACCACCGTGCAGGAA
AAAGCGATCGCCCATCCCACCGACAGCCGTTTGCTGGAGGTGGCGCGCAAGAAGCTGGTGCTGCTGGCCAAGCGCCACGG
CATCGTCTTGCGGCAGACCTATGTGAGGCAAGGTCCGGGGTTGAGCCGCAAGGCCGGGCGCTATGCGCATGCGCGCCAGT
TCAAGCGCATGCGCAAGGTACTGCGACGCCAACGCACGATCCTGGGACGCGTATTACGCGATCTGCAACGCAAGCTGGCC
CAGCTGGAACCGTCGGTGCGTGAGCGCATCGGTGTCTGGTTGGAGCGCGCACAACGGTTGTTGACACAGCGTCCCAAGGA
CAAACAAAAACTCTACGCCTTGCACGCGCCGGAAGTGGAATGCATCAGCAAGGGCAAGGCAAGCAGCCCGTACGAATTTG
GCGTCAAGGTCGGCATTGCGGTGAGTGCGCGCAAGGGCTTGATCGTGGGCGCGCGCAGTTTCCCGGGTAACCCGTACGAC
GGCGACACGCTGGCTGAGCAACTGGAACAGGCGCGCGGGCTGCTGCAGGATGTGAATGTGATCCCGCAGGTGGCGATCGT
GGACCTGGGGTATCGCGGGTGCGACGTGGAGGGTGTGCAGATCCTGCATCGGGGCAAAGCCAAGACGCTGACACGACGGC
AATGGAGCTGGATCAAACGACGGCAAGCGGTAGAGCCGGTGATCGGACATCTGAAACAGGACTGCCGCTTGAATCGTTGC
CATCTCAACGGCGCCCAAGGCGATGCACTGCACGTGCTCGGCTGCGCCGCTGGCTACAACCTGCGGTGGCTGCTGCGCTG
GATCGCCTTTTTGCGTGCCTGGTTGCAGGTGGTGCGGGCGCGCCCCTCAACGTGCTCAAGCATCATGTGGCCAGCAAACA
TGGCATTTGGTGTTTGA

Upstream 100 bases:

>100_bases
CCCCAGACCACATCCATTGCAAGGCCTCACCTGCGGTTTTGGCGTGCTGGAACTGCCAGTTTTCATTACTCTACGTACTG
GTTTCTGGCAGTTTTCGCCC

Downstream 100 bases:

>100_bases
GAGGGTTTTTCAGGGGCGACTAATGACCACTCCCCAATTCCTGCGTGCGCAAACGCTTCGCGATCGCCAATCCCGTCTCT
GCTCTACGCATCCCAATGCC

Product: ISXoo4 transposase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDL
SDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEELLAHTINTAHAMKAVDTRELSRVIVDTTVQE
KAIAHPTDSRLLEVARKKLVLLAKRHGIVLRQTYVRQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLA
QLEPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIAVSARKGLIVGARSFPGNPYD
GDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGCDVEGVQILHRGKAKTLTRRQWSWIKRRQAVEPVIGHLKQDCRLNRC
HLNGAQGDALHVLGCAAGYNLRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMAFGV

Sequences:

>Translated_458_residues
MRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDL
SDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEELLAHTINTAHAMKAVDTRELSRVIVDTTVQE
KAIAHPTDSRLLEVARKKLVLLAKRHGIVLRQTYVRQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLA
QLEPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIAVSARKGLIVGARSFPGNPYD
GDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGCDVEGVQILHRGKAKTLTRRQWSWIKRRQAVEPVIGHLKQDCRLNRC
HLNGAQGDALHVLGCAAGYNLRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMAFGV
>Mature_458_residues
MRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDL
SDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEELLAHTINTAHAMKAVDTRELSRVIVDTTVQE
KAIAHPTDSRLLEVARKKLVLLAKRHGIVLRQTYVRQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLA
QLEPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIAVSARKGLIVGARSFPGNPYD
GDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGCDVEGVQILHRGKAKTLTRRQWSWIKRRQAVEPVIGHLKQDCRLNRC
HLNGAQGDALHVLGCAAGYNLRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMAFGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 52066; Mature: 52066

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTSTGGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
PALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQ
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
RLGEAGMEELLAHTINTAHAMKAVDTRELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLAKRHGIVLRQTYVRQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLA
HHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIA
HCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHCCCCCCCHHCCEEEEEE
VSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGCDVEGVQ
EECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHH
ILHRGKAKTLTRRQWSWIKRRQAVEPVIGHLKQDCRLNRCHLNGAQGDALHVLGCAAGYN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEHHCCCC
LRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMAFGV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHCCC
>Mature Secondary Structure
MRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTSTGGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
PALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQ
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
RLGEAGMEELLAHTINTAHAMKAVDTRELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLAKRHGIVLRQTYVRQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLA
HHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIA
HCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHCCCCCCCHHCCEEEEEE
VSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGCDVEGVQ
EECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHH
ILHRGKAKTLTRRQWSWIKRRQAVEPVIGHLKQDCRLNRCHLNGAQGDALHVLGCAAGYN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEHHCCCC
LRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMAFGV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]