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The map label for this gene is recO [H]

Identifier: 84623410

GI number: 84623410

Start: 1937328

End: 1938050

Strand: Direct

Name: recO [H]

Synonym: XOO_1753

Alternate gene names: 84623410

Gene position: 1937328-1938050 (Clockwise)

Preceding gene: 84623409

Following gene: 162319803

Centisome position: 39.22

GC content: 64.87

Gene sequence:

>723_bases
ATGCTGATCGAGCACGAACGCGGGTTCGTCCTGCACGTGCGGGCCTGGCGCGAGACCAGCCTGCTGGTGGAGGTATTGAC
CGAGCAGCACGGGCGGGTGGGGCTGTTGGCGCGCGGAGTCCATGGGCCGCGCAAGCAGGCCTTGCGTGCTGCCTTGCAGC
CATTGCAGTTGATTCAGTTCAGCGCCGTGCAGCGCGGCGAGCTGGCACAACTGCGTCAGGCTGAAGCGCTGGATACTGCG
CCTCGGCTAGTCGGCGACACCATGCTGGCCGGTTTCTATATCAGCGAATTGTTGCTGCGCTTGGCACCGCGCAACGATCC
GGTGCCCGAACTCTATGCCTGTTATACGCAGGCGCGGACGCACCTGGCAGCCGATCTTCCATTGGCATGGGGGTTGCGTC
GGTTCGAGCGCGACGTGCTGGAAGGGCTGGGGTTTGCCTTCGATCTGCAGCACGACAGCGACGGGCAACCGATCGACCCG
GCAGCGCGGTATCGGCTGGATCCGGAGGAAGGCGCCTTGCGTGTGTTAAGCGAGCGGCTGGCGCAGGATCGCCGCGAAAC
CGTCACCGGTGCGGCGCTGCTGGCACTGGGTGAGGACGTCATGCCAGCCGCAGAGGATATGCCTGGTCTGCGGCGCAGCA
TGCGCAGTGTGCTGCTGCATCATCTGGGTGGGCGCGGCTTGAAATCCTGGGAAATGCTTGAGGATCTGGCACGGCGTCGT
TGA

Upstream 100 bases:

>100_bases
GCTCGGCTCCCCGTTGCCGTGCCGCGTCGCCATTTGGCGGCCGATCCTTCTATTTTCAAGGGTTTCCGGTCTCTGATCCC
CAATCTCACCTTCTCCGCGC

Downstream 100 bases:

>100_bases
TCGGGCCAGCCCTGGTGTGTGCGCGCTCCTGCAGCAGTCAGTGCGGCAGTGCTTTCAGCGCTACTAGCCGCGCGCATCTC
AATCCGGAAGGCTGCACTAC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQRGELAQLRQAEALDTA
PRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDP
AARYRLDPEEGALRVLSERLAQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR

Sequences:

>Translated_240_residues
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQRGELAQLRQAEALDTA
PRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDP
AARYRLDPEEGALRVLSERLAQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR
>Mature_240_residues
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQRGELAQLRQAEALDTA
PRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDP
AARYRLDPEEGALRVLSERLAQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=237, Percent_Identity=36.2869198312236, Blast_Score=121, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26940; Mature: 26940

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF
CCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
SAVQRGELAQLRQAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQART
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
HLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARYRLDPEEGALRVLSERL
HHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
AQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR
HHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF
CCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
SAVQRGELAQLRQAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQART
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
HLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARYRLDPEEGALRVLSERL
HHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
AQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR
HHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]