| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623368
Identifier: 84623368
GI number: 84623368
Start: 1885248
End: 1885562
Strand: Direct
Name: 84623368
Synonym: XOO_1711
Alternate gene names: NA
Gene position: 1885248-1885562 (Clockwise)
Preceding gene: 84623367
Following gene: 84623373
Centisome position: 38.16
GC content: 62.22
Gene sequence:
>315_bases GTGTTGGTGATGGATGGGCCGCGCTTGGTCGGGATCGTCTCCGAACGCCATTACGCGCGCAAGGTGGTGCTGCGTGATCG CTCGTCTTCCACGACCAGCGTCGCCGAGATCATGAGCGCCGAGGTGGTGACGGTGTCGCCATCGGACACGGTGGAGCGCT GCATGCAACTGATGACCGACGGGCGCTTTCGGCATCTGCCGGTGGTCGAAAACGGCCGCGTGCAAGGTGTGATTTCGATT GGCGACCTGGTCAAGGCGGTGATCGAAGCGCAGCAGCAGGATATCGACCAACTGCAGCGCTACATCGCCAGTTGA
Upstream 100 bases:
>100_bases ACAGCTGTTGGGGACCAAGCAGGTTGAGGTATTTGCGGTTGCGTCCGATGCCGCGGTGATCGAGGCGATTGGCTTGATGG CCTAGAAGGCTGTTGGCGCG
Downstream 100 bases:
>100_bases TGCTGCAGCGCGTTATTGCGCGTACTTGCCACCGCAATCGCTGTCCTTGCCTGGGCCTGGTTCGAAGGTCGCGAGCAGGG CAGCTGGCGGGGCGATGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Protein With CBS Domains; CBS Domain-Containing Protein; CBS Domain Protein; CBS Domain Containing Protein; Signal-Transduction Protein With CBS Domains; Signal Transduction Protein; Signal Transduction Protein With Cbs Domains; CBS Domain Containing Membrane Protein; Inosine-5-Monophosphate Dehydrogenase; IMP Dehydrogenase; CBS Domain-Containing Signal Transduction Protein; XRE Family Transcriptional Regulator; Signal-Transduction Protein With CBS; CBS Domain Pair Family; CBS Domains; CBS Domain Pair Family Protein; Signal-Transduction Protein With Cbs Domains
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLVMDGPRLVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISI GDLVKAVIEAQQQDIDQLQRYIAS
Sequences:
>Translated_104_residues MLVMDGPRLVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISI GDLVKAVIEAQQQDIDQLQRYIAS >Mature_104_residues MLVMDGPRLVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISI GDLVKAVIEAQQQDIDQLQRYIAS
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11541; Mature: 11541
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVMDGPRLVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTD CEEECCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHCC GRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYIAS CCEEECCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVMDGPRLVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTD CEEECCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHCC GRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYIAS CCEEECCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA