| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623331
Identifier: 84623331
GI number: 84623331
Start: 1833310
End: 1833681
Strand: Direct
Name: 84623331
Synonym: XOO_1674
Alternate gene names: NA
Gene position: 1833310-1833681 (Clockwise)
Preceding gene: 84623330
Following gene: 84623332
Centisome position: 37.11
GC content: 63.44
Gene sequence:
>372_bases ATGACCCTGTTCCGCGAGGAGGTCATGCAAGCACGCCGCAACAGTTGGCTGGGCGGCATCTCCCTGGCGCAGCCTGTGCG GGCATGGGTGCTCGCCAGCGCCGCCGGGATCGTGGCGGCATCTGTCGTGGTCTTCCTGTGCATGGGCACCTATGCCCACC GCTCCACGGTGACCGGACAACTCGTACCGATCAAAGGCCTGGCCACGGTGATGGCGCCGGCCACCGGCGTCGTGAGCCGG CTGGACGTCAGCGAAGGGCAACCGGTCAAGGCCGGGCAGATGCTGGCCGTGGTCACGGTTCCGCGCGCGACATATTTAAT ATTTCCAGAATACCTGGAAATCGCAATCCTGAGGCGAATTAACTCAGGCTAA
Upstream 100 bases:
>100_bases CGGAGCAGGCGTTACCGATCGTATGCGTGACGTTGATCGGCCCATTCACCCTGTGCGCGATGATGGTGTCCGCTCGCCGT ACCGGTCGAGAGAACACGCC
Downstream 100 bases:
>100_bases AATGGAGCAGGATATGTACGAGCTAAGCGCAGATGAAATTAACATGGTATCAGGGGGCCTGGGGCTTGCCGACTTCACAG GTGCAGCCGGCGGCTTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Colicin V Secretion Protein; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Auxiliary Transport Protein Membrane Fusion Protein
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTLFREEVMQARRNSWLGGISLAQPVRAWVLASAAGIVAASVVVFLCMGTYAHRSTVTGQLVPIKGLATVMAPATGVVSR LDVSEGQPVKAGQMLAVVTVPRATYLIFPEYLEIAILRRINSG
Sequences:
>Translated_123_residues MTLFREEVMQARRNSWLGGISLAQPVRAWVLASAAGIVAASVVVFLCMGTYAHRSTVTGQLVPIKGLATVMAPATGVVSR LDVSEGQPVKAGQMLAVVTVPRATYLIFPEYLEIAILRRINSG >Mature_122_residues TLFREEVMQARRNSWLGGISLAQPVRAWVLASAAGIVAASVVVFLCMGTYAHRSTVTGQLVPIKGLATVMAPATGVVSRL DVSEGQPVKAGQMLAVVTVPRATYLIFPEYLEIAILRRINSG
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13141; Mature: 13010
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFREEVMQARRNSWLGGISLAQPVRAWVLASAAGIVAASVVVFLCMGTYAHRSTVTGQ CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LVPIKGLATVMAPATGVVSRLDVSEGQPVKAGQMLAVVTVPRATYLIFPEYLEIAILRRI EEEHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHH NSG CCC >Mature Secondary Structure TLFREEVMQARRNSWLGGISLAQPVRAWVLASAAGIVAASVVVFLCMGTYAHRSTVTGQ CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LVPIKGLATVMAPATGVVSRLDVSEGQPVKAGQMLAVVTVPRATYLIFPEYLEIAILRRI EEEHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHH NSG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA