| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is cutC [H]
Identifier: 84623318
GI number: 84623318
Start: 1816818
End: 1817549
Strand: Direct
Name: cutC [H]
Synonym: XOO_1661
Alternate gene names: 84623318
Gene position: 1816818-1817549 (Clockwise)
Preceding gene: 84623317
Following gene: 84623321
Centisome position: 36.78
GC content: 65.44
Gene sequence:
>732_bases ATGAGTGCATTAGGTCTTGAAGTGGCCGCCGATTCGGTGGCCTCGGCGTTGGCCGCGCAAGAAGGCGGAGCGATGCGCGT GGAGCTGTGCGGTGGGCTGGATGGCGGCGGGCTGACGCCGTCGTTCGGCACGTTGGCCGTGGTGCGCGAGCGTTTGCGGA TTCCGCTGTATGTACTGATTCGTCCGCGCGTGGGCGACTTCGTGTTCGACGCTGCCGAAGTGGAAGTGATGCGCCGCGAT GTGGAGCAATGCGTGCGGCTTGGCTGCGATGGCGTGGTATTAGGCGCGCTGGATCGGCATGGGCAGGTGGATCTTACGAC GATGCGCGTGTTGATCGAGGCAGCGGGATCGTTGGGGGTGACGTTTCATCGGGCGATCGATGTCAGTGCCGATCCATCGC GTGTGCTCGAAGATGCGGTCGCACTGGGCTGCGAGCGCGTGCTGACTTCGGGCGGGCGGGCGACGGCGATCGATGGCATC GACACCATCGCGGCCCTGGTGCGACAGGCCGGTGACCGGATCAGCATCATGCCGGGTGCAGGCGTGTCGGAAAGTAACGT GCTGGCGCTGCGGGCCAACACCGGTGCGCACGAGTTTCACGCGTCGTCACGTGGGCCGGTTGCAGCGCAGGTGCATGCGC CGCACGCCTACATCAGCGACTTGGGCGGCGACTATCAGCGTACCGATGTGGCGCGCGTGCGGCGAATCGTGGGGTTGTTG CGGCAAGATTGA
Upstream 100 bases:
>100_bases CGTTCGCGATTCAGAAGGGCTTTAGCTACGCGGTGTGCGATGCGCAGCGGCAGGATCTGCTGGTGCCTGGTGAGAGCCAT TACACCAGCGAGCCGGCAGC
Downstream 100 bases:
>100_bases AATGCGCACAACGTGCCGCGACAGCTAGCGCGAGGGTTCCGAGGTTGTTTGCTGCTTGCTATCGGAGTCATCGCTCGCCT GCTCGGGAATGTGTATGGTG
Product: copper homeostasis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSALGLEVAADSVASALAAQEGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYVLIRPRVGDFVFDAAEVEVMRRD VEQCVRLGCDGVVLGALDRHGQVDLTTMRVLIEAAGSLGVTFHRAIDVSADPSRVLEDAVALGCERVLTSGGRATAIDGI DTIAALVRQAGDRISIMPGAGVSESNVLALRANTGAHEFHASSRGPVAAQVHAPHAYISDLGGDYQRTDVARVRRIVGLL RQD
Sequences:
>Translated_243_residues MSALGLEVAADSVASALAAQEGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYVLIRPRVGDFVFDAAEVEVMRRD VEQCVRLGCDGVVLGALDRHGQVDLTTMRVLIEAAGSLGVTFHRAIDVSADPSRVLEDAVALGCERVLTSGGRATAIDGI DTIAALVRQAGDRISIMPGAGVSESNVLALRANTGAHEFHASSRGPVAAQVHAPHAYISDLGGDYQRTDVARVRRIVGLL RQD >Mature_242_residues SALGLEVAADSVASALAAQEGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYVLIRPRVGDFVFDAAEVEVMRRDV EQCVRLGCDGVVLGALDRHGQVDLTTMRVLIEAAGSLGVTFHRAIDVSADPSRVLEDAVALGCERVLTSGGRATAIDGID TIAALVRQAGDRISIMPGAGVSESNVLALRANTGAHEFHASSRGPVAAQVHAPHAYISDLGGDYQRTDVARVRRIVGLLR QD
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=199, Percent_Identity=46.2311557788945, Blast_Score=180, Evalue=1e-45, Organism=Escherichia coli, GI87081995, Length=198, Percent_Identity=43.4343434343434, Blast_Score=147, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17556905, Length=234, Percent_Identity=38.8888888888889, Blast_Score=153, Evalue=6e-38, Organism=Drosophila melanogaster, GI21355415, Length=216, Percent_Identity=40.2777777777778, Blast_Score=151, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 25431; Mature: 25300
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALGLEVAADSVASALAAQEGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYVLI CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEE RPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALDRHGQVDLTTMRVLIEAAGSLGV ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCE TFHRAIDVSADPSRVLEDAVALGCERVLTSGGRATAIDGIDTIAALVRQAGDRISIMPGA EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEEECCC GVSESNVLALRANTGAHEFHASSRGPVAAQVHAPHAYISDLGGDYQRTDVARVRRIVGLL CCCCCCEEEEEECCCCHHHCCCCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHH RQD HCC >Mature Secondary Structure SALGLEVAADSVASALAAQEGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYVLI CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEE RPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALDRHGQVDLTTMRVLIEAAGSLGV ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCE TFHRAIDVSADPSRVLEDAVALGCERVLTSGGRATAIDGIDTIAALVRQAGDRISIMPGA EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEEECCC GVSESNVLALRANTGAHEFHASSRGPVAAQVHAPHAYISDLGGDYQRTDVARVRRIVGLL CCCCCCEEEEEECCCCHHHCCCCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHH RQD HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]