| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623309
Identifier: 84623309
GI number: 84623309
Start: 1807455
End: 1808657
Strand: Direct
Name: 84623309
Synonym: XOO_1652
Alternate gene names: NA
Gene position: 1807455-1808657 (Clockwise)
Preceding gene: 84623308
Following gene: 84623310
Centisome position: 36.59
GC content: 68.25
Gene sequence:
>1203_bases ATGGGAACTCCGGTTGCTTTGCTGGGTCGTCCGGGGCAGGCGCGCGAGCGCCTGCGCGAAGCGCTCGTCTTGGCTGGTGC GCAGGTGGTGCTGGAAGACGAGCCATCGGCGGTCGACGTGCAGATGCTGCGCGACGCCGAGCCGGTGGCGGTGCTGGTCG CACTCGAGCCGTTGATCGAAGACGCACTCGAAGCGCTGGAGCCGGCTTTCAACATGCCTGGCGTCACCGTGATCTTCGAC GAGGCCGAACTAACGGTGCGTCGCGAGGGCTGGGAAGCGCAGCGTTGGGTGCGCCATCTGGCGGCAAAACTGCACGGCCA CGCCGACGTCTTGCCACCGGGCACCGAAAGCGAACCATCGCTGCAGCCCGAGCCGGGTCTGGCGCTGGCCTCGCGCCAGC ATTCGGACCTGCAGCTGGATCAACACCTGGAAGCCGCCGCGCATGCGTTCGAAACCGTGCCCAGCGATGCCTTGTGTGCG CGTGCATCCACGCATGACGCTGCGCCAGCCGCTTCGGAAAAGCCGGGTTTGACCCTGAGCGATTCCAGCACCTGGGGCTT GCTGGACGAAGTGACCGTGGTGGTGCGCCCGCGCGCCGAAGCACATGTGTCTTCAGCGGATGTGTCTTCGCTGTCGACCG GCGGATTGTCGCTGGTGGATCTGGAGCACAGCGGCAGCGTCACCGGCGCAGTGTTGGTGATGGCCGGCATCGGCGGGCCC GATGCGATCCGCCGTCTGCTGGCCGCATTGCCGCCGGAATTTCCGCGCGCGGTGCTGGTGCGCATGACCCTGGATGGCGG CCAGTACGGCAACCTGGTGCGGCAGATGGGGCGTGTGTCTGCGCTGCCGGTCGAACTGGGTGAGGCGGGGCAGGTGGTCG TGCCGGGCAAGGTGTACGTGCTCTCCGACGAGGTCGGCGTGCACCAGCATGCTGGCGCGCTGGCATTCGTGTCGCCGGCC GACCCGGCCGGTCTGATCGCTGCGCTGCCGCCGGCCGACAGTGCGGTGCTGATGCTCAGCGGTGCCAACGAGGCGATGGT AGAAGCATCGCTGGCATTGGCGGAGCAGGGCGGCTGGTTGGCCGGCCAATCCATCGACGGCTCTTACGACCCCGCCGCCG CCGCGCGGCTGGCGCGGCAAGGCATTCTGACCGGCGATCCTGCGCAGTTGGCGCAGGCGCTTGCACAGCGTTGGCCGGCA TAA
Upstream 100 bases:
>100_bases GGCGTGCAGCGTTACCTGGGCAAGCCTTACCAGGAGTTGGATCTGATGCGAAACGTGTATGACCTGCTGGGGATCGCCCG TGTCCGAGACTAATGGCGCA
Downstream 100 bases:
>100_bases GCCGGGCGTTTCCTTTCGAATCGGAATCATGCGATGAGCTACGCCAATAACGACGAAATCCGCGGGGTCCTGATCCAGGC CGGACAGGAGCGTGTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Chemotaxis-Related Protein
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MGTPVALLGRPGQARERLREALVLAGAQVVLEDEPSAVDVQMLRDAEPVAVLVALEPLIEDALEALEPAFNMPGVTVIFD EAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLALASRQHSDLQLDQHLEAAAHAFETVPSDALCA RASTHDAAPAASEKPGLTLSDSSTWGLLDEVTVVVRPRAEAHVSSADVSSLSTGGLSLVDLEHSGSVTGAVLVMAGIGGP DAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVVPGKVYVLSDEVGVHQHAGALAFVSPA DPAGLIAALPPADSAVLMLSGANEAMVEASLALAEQGGWLAGQSIDGSYDPAAAARLARQGILTGDPAQLAQALAQRWPA
Sequences:
>Translated_400_residues MGTPVALLGRPGQARERLREALVLAGAQVVLEDEPSAVDVQMLRDAEPVAVLVALEPLIEDALEALEPAFNMPGVTVIFD EAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLALASRQHSDLQLDQHLEAAAHAFETVPSDALCA RASTHDAAPAASEKPGLTLSDSSTWGLLDEVTVVVRPRAEAHVSSADVSSLSTGGLSLVDLEHSGSVTGAVLVMAGIGGP DAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVVPGKVYVLSDEVGVHQHAGALAFVSPA DPAGLIAALPPADSAVLMLSGANEAMVEASLALAEQGGWLAGQSIDGSYDPAAAARLARQGILTGDPAQLAQALAQRWPA >Mature_399_residues GTPVALLGRPGQARERLREALVLAGAQVVLEDEPSAVDVQMLRDAEPVAVLVALEPLIEDALEALEPAFNMPGVTVIFDE AELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLALASRQHSDLQLDQHLEAAAHAFETVPSDALCAR ASTHDAAPAASEKPGLTLSDSSTWGLLDEVTVVVRPRAEAHVSSADVSSLSTGGLSLVDLEHSGSVTGAVLVMAGIGGPD AIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVVPGKVYVLSDEVGVHQHAGALAFVSPAD PAGLIAALPPADSAVLMLSGANEAMVEASLALAEQGGWLAGQSIDGSYDPAAAARLARQGILTGDPAQLAQALAQRWPA
Specific function: Unknown
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41506; Mature: 41375
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPVALLGRPGQARERLREALVLAGAQVVLEDEPSAVDVQMLRDAEPVAVLVALEPLIE CCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHCCCCCEEEEEHHHHHHH DALEALEPAFNMPGVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPS HHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LQPEPGLALASRQHSDLQLDQHLEAAAHAFETVPSDALCARASTHDAAPAASEKPGLTLS CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEC DSSTWGLLDEVTVVVRPRAEAHVSSADVSSLSTGGLSLVDLEHSGSVTGAVLVMAGIGGP CCCCCCHHHCEEEEECCCHHHHCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCH DAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVVPGKVYV HHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEECCEECCCCCCEEECCEEEE LSDEVGVHQHAGALAFVSPADPAGLIAALPPADSAVLMLSGANEAMVEASLALAEQGGWL EECCCCCHHCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEE AGQSIDGSYDPAAAARLARQGILTGDPAQLAQALAQRWPA ECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GTPVALLGRPGQARERLREALVLAGAQVVLEDEPSAVDVQMLRDAEPVAVLVALEPLIE CCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHCCCCCEEEEEHHHHHHH DALEALEPAFNMPGVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPS HHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LQPEPGLALASRQHSDLQLDQHLEAAAHAFETVPSDALCARASTHDAAPAASEKPGLTLS CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEC DSSTWGLLDEVTVVVRPRAEAHVSSADVSSLSTGGLSLVDLEHSGSVTGAVLVMAGIGGP CCCCCCHHHCEEEEECCCHHHHCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCH DAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVVPGKVYV HHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEECCEECCCCCCEEECCEEEE LSDEVGVHQHAGALAFVSPADPAGLIAALPPADSAVLMLSGANEAMVEASLALAEQGGWL EECCCCCHHCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEE AGQSIDGSYDPAAAARLARQGILTGDPAQLAQALAQRWPA ECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA