| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623178
Identifier: 84623178
GI number: 84623178
Start: 1668460
End: 1670079
Strand: Direct
Name: 84623178
Synonym: XOO_1521
Alternate gene names: NA
Gene position: 1668460-1670079 (Clockwise)
Preceding gene: 84623177
Following gene: 84623179
Centisome position: 33.77
GC content: 65.19
Gene sequence:
>1620_bases GTGAGCAAGAATCCGGTTGAACAACGCATTGCGCTGTTGCGCGATGAGTGGATGCAGGCCAGCGACGACCCTGCGCTGCG GTTGTTTGTCTGGCGTGTGCCGGCCAACGCCTTGCGTCTGCTGGCAGCGTTTTTCGAGGCACAGAAGCATCCGGGCGATT GGAACGTGCCCGACTATTTCCTGCGCCTCGATACTTCGTTCGACACCAGTTTCGGCTACAGCCGTGCGCTGAAGCTGGCA CTGTCGGCCAGCTACCTCGGCAGCCAGAGCGAGCTGCGCGAGCAAGGTGTCGATCTTGGCTGGCGTGTGCCCGGCCCGTC GCACGCCGACACCGCGGCGGGCGTGCAGGCGGTGTTCGAATCGTTTGCCACGCATCATGCGGCGTACCTGCGCTACCTGG CAGTGGTCCTTGAACCTGAGCGGGTGACGTCGCCAGAAGCGTTCATTGCCTGGGTCGATGCCGCGATGGCAGCGTCGACA TCACCCGCGCTGCGGCTGGTTCTGGTGGACACCTATGAAGATCCGCGCTGGCAGCCATTACTGGATCGGCACGCCGCGCG CGCGCACCGTATTGCGCCGCAGGTGGACATGTTCGATATCGGGCGCGAAATTGCAGCGCAGTCGGGCGGTGCGGGGCCAG CGGTGGCGTATCGCCAGTTGTTGAGTGACCTCATGCTGGTGCTTGAGCGCGGCAGCGCTGCCCAGCTTGCCCAACGCATC GAGCGCCCGATGGCATTGGCACAGCGGCATGGCTGGAGCGATCAGCAGGTGGTGTTGAGCATGATGCTCGCTGGCGGCTG GTTAATTGAGAAGCACTATCCTGCTGCCATCAGCAGTTATCGTCAGGCGCGCGATCACGCAACACAGGCCCTGACCGGCG GGCATCCGGCCGCGCGCGATCTGTTGATGCAAGGCTGGTTCGGCGAGGCGGGGACGTGGTTTGCCGCAGGGCAGCCCGAC CGTGCGGTTCAGGGGTATCTGTCTGCCGCGCAGACCGCTGCCGAGATTCCCAACCCGATGTTCGTGATCGAGGCCTATCG CATGGCCGCGTTCTGTCTGGCGCAGGACGGCCAGCGCGAGGCGGCGCGCAACTACGGGCTGGAGGCCGTGCGCGCTGCCA AACCGCTGCGAAGCGAGGATCGCCGCTCCACCACCTTGCCGCAAACCCTGCAGGACCTGCTTGTACTGCAAGACAAGCGG CGCGCACACAGGATCGAGCAGTGTGCGGCGACCTATCTGCAGTCGGTGAGCACGCTGCACGCGCAGGCCGAACAGCAGGC TGCACGACTGGGCGCGCAGCCTTCGTCGGCGCACCTGGACCAGATCGAATCCACCCTGCATGCTGGACTGGAACACGCGT TTCATCGAGCAGCCCAGGAACGCGAGCGTTTGATCCAGGGGGGCGACGAATTCTTCCGCAAGGTGGTCGCGGTCGGCCGT GAATTCCTGCATTCCACCTGGAATGGCCTGCCGGATATTCGCCATCCGCTGGACAACGAGATTCCCGCCTGGACCCAACC GCCGGCGACCCAACCGCTTCCGGATCCCGCCGCACTGACCCAATCTCCCGGCGCCGCACCATCGGTGGGCCTGGCCGGAC GCACCGAGGCCACCGCATGA
Upstream 100 bases:
>100_bases CCGCCGGTGGCTCCACCATCGTGATCGACGGCTCGGGCGTGTCCGTCAACGGGGCGGAAATCAAGCTCAATTGCTGACGC CTGGGAGGGCATGCCACACC
Downstream 100 bases:
>100_bases ATTCGCGCCACTTGGCCGTGCTGGCCGTCTTCATCCTGATCGGCATGGCCGTGGTGGTGTGGCTGGGCATGGAATACCGC GACGAGGTGCGTGCCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MSKNPVEQRIALLRDEWMQASDDPALRLFVWRVPANALRLLAAFFEAQKHPGDWNVPDYFLRLDTSFDTSFGYSRALKLA LSASYLGSQSELREQGVDLGWRVPGPSHADTAAGVQAVFESFATHHAAYLRYLAVVLEPERVTSPEAFIAWVDAAMAAST SPALRLVLVDTYEDPRWQPLLDRHAARAHRIAPQVDMFDIGREIAAQSGGAGPAVAYRQLLSDLMLVLERGSAAQLAQRI ERPMALAQRHGWSDQQVVLSMMLAGGWLIEKHYPAAISSYRQARDHATQALTGGHPAARDLLMQGWFGEAGTWFAAGQPD RAVQGYLSAAQTAAEIPNPMFVIEAYRMAAFCLAQDGQREAARNYGLEAVRAAKPLRSEDRRSTTLPQTLQDLLVLQDKR RAHRIEQCAATYLQSVSTLHAQAEQQAARLGAQPSSAHLDQIESTLHAGLEHAFHRAAQERERLIQGGDEFFRKVVAVGR EFLHSTWNGLPDIRHPLDNEIPAWTQPPATQPLPDPAALTQSPGAAPSVGLAGRTEATA
Sequences:
>Translated_539_residues MSKNPVEQRIALLRDEWMQASDDPALRLFVWRVPANALRLLAAFFEAQKHPGDWNVPDYFLRLDTSFDTSFGYSRALKLA LSASYLGSQSELREQGVDLGWRVPGPSHADTAAGVQAVFESFATHHAAYLRYLAVVLEPERVTSPEAFIAWVDAAMAAST SPALRLVLVDTYEDPRWQPLLDRHAARAHRIAPQVDMFDIGREIAAQSGGAGPAVAYRQLLSDLMLVLERGSAAQLAQRI ERPMALAQRHGWSDQQVVLSMMLAGGWLIEKHYPAAISSYRQARDHATQALTGGHPAARDLLMQGWFGEAGTWFAAGQPD RAVQGYLSAAQTAAEIPNPMFVIEAYRMAAFCLAQDGQREAARNYGLEAVRAAKPLRSEDRRSTTLPQTLQDLLVLQDKR RAHRIEQCAATYLQSVSTLHAQAEQQAARLGAQPSSAHLDQIESTLHAGLEHAFHRAAQERERLIQGGDEFFRKVVAVGR EFLHSTWNGLPDIRHPLDNEIPAWTQPPATQPLPDPAALTQSPGAAPSVGLAGRTEATA >Mature_538_residues SKNPVEQRIALLRDEWMQASDDPALRLFVWRVPANALRLLAAFFEAQKHPGDWNVPDYFLRLDTSFDTSFGYSRALKLAL SASYLGSQSELREQGVDLGWRVPGPSHADTAAGVQAVFESFATHHAAYLRYLAVVLEPERVTSPEAFIAWVDAAMAASTS PALRLVLVDTYEDPRWQPLLDRHAARAHRIAPQVDMFDIGREIAAQSGGAGPAVAYRQLLSDLMLVLERGSAAQLAQRIE RPMALAQRHGWSDQQVVLSMMLAGGWLIEKHYPAAISSYRQARDHATQALTGGHPAARDLLMQGWFGEAGTWFAAGQPDR AVQGYLSAAQTAAEIPNPMFVIEAYRMAAFCLAQDGQREAARNYGLEAVRAAKPLRSEDRRSTTLPQTLQDLLVLQDKRR AHRIEQCAATYLQSVSTLHAQAEQQAARLGAQPSSAHLDQIESTLHAGLEHAFHRAAQERERLIQGGDEFFRKVVAVGRE FLHSTWNGLPDIRHPLDNEIPAWTQPPATQPLPDPAALTQSPGAAPSVGLAGRTEATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59280; Mature: 59149
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNPVEQRIALLRDEWMQASDDPALRLFVWRVPANALRLLAAFFEAQKHPGDWNVPDYF CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEE LRLDTSFDTSFGYSRALKLALSASYLGSQSELREQGVDLGWRVPGPSHADTAAGVQAVFE EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHH SFATHHAAYLRYLAVVLEPERVTSPEAFIAWVDAAMAASTSPALRLVLVDTYEDPRWQPL HHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH LDRHAARAHRIAPQVDMFDIGREIAAQSGGAGPAVAYRQLLSDLMLVLERGSAAQLAQRI HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERPMALAQRHGWSDQQVVLSMMLAGGWLIEKHYPAAISSYRQARDHATQALTGGHPAARD HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LLMQGWFGEAGTWFAAGQPDRAVQGYLSAAQTAAEIPNPMFVIEAYRMAAFCLAQDGQRE HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH AARNYGLEAVRAAKPLRSEDRRSTTLPQTLQDLLVLQDKRRAHRIEQCAATYLQSVSTLH HHHHCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEQQAARLGAQPSSAHLDQIESTLHAGLEHAFHRAAQERERLIQGGDEFFRKVVAVGR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH EFLHSTWNGLPDIRHPLDNEIPAWTQPPATQPLPDPAALTQSPGAAPSVGLAGRTEATA HHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKNPVEQRIALLRDEWMQASDDPALRLFVWRVPANALRLLAAFFEAQKHPGDWNVPDYF CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEE LRLDTSFDTSFGYSRALKLALSASYLGSQSELREQGVDLGWRVPGPSHADTAAGVQAVFE EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHH SFATHHAAYLRYLAVVLEPERVTSPEAFIAWVDAAMAASTSPALRLVLVDTYEDPRWQPL HHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH LDRHAARAHRIAPQVDMFDIGREIAAQSGGAGPAVAYRQLLSDLMLVLERGSAAQLAQRI HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERPMALAQRHGWSDQQVVLSMMLAGGWLIEKHYPAAISSYRQARDHATQALTGGHPAARD HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LLMQGWFGEAGTWFAAGQPDRAVQGYLSAAQTAAEIPNPMFVIEAYRMAAFCLAQDGQRE HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH AARNYGLEAVRAAKPLRSEDRRSTTLPQTLQDLLVLQDKRRAHRIEQCAATYLQSVSTLH HHHHCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEQQAARLGAQPSSAHLDQIESTLHAGLEHAFHRAAQERERLIQGGDEFFRKVVAVGR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH EFLHSTWNGLPDIRHPLDNEIPAWTQPPATQPLPDPAALTQSPGAAPSVGLAGRTEATA HHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA