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The map label for this gene is 84623109

Identifier: 84623109

GI number: 84623109

Start: 1583373

End: 1583963

Strand: Direct

Name: 84623109

Synonym: XOO_1452

Alternate gene names: NA

Gene position: 1583373-1583963 (Clockwise)

Preceding gene: 84623108

Following gene: 84623110

Centisome position: 32.05

GC content: 65.14

Gene sequence:

>591_bases
ATGACCAAGGCAAAAAAGAAGGCCACACAGCAGCCGGTGCAGGCACCGGTGTATCAACTGCATGTGGCATTGACCGGCAG
TGCGCCGTTGATCTGGCGGCGCCTGCTGGTGTCGGGCGCGGCGCGCCTGGCCACGCTGCATCGCGTCTTGCAGCCGGTGA
TGGGCTGGAATAACACGCATCCCTACGAGTTCGACCTGGGCGTGGGGCGTTATGGCGAATCCGGGCTGGATGTGCCGGAG
CGTCCACGGCTCAAACATGCTGGTCGTGTCACCCTGGAAAGCGCCCTGGGCCAACTGGAAAGCTTCGATTATTTCTACGG
CGCCGGGCAGGGCTGGCAGCATCGCTTGCAGGTGGAAGCGTTGCTGCCGCCGGATGCCGGCCTGCGTGTGGCGCGCTGTG
TGGAGGGCGTCAACGCCTGCCCGCCAGGGAGCAGCGGCGGCATTGACGACTATCAGACGCTGTTGCAGATCCTCGCCGAC
CCGGACCACGCGCAGCATGTGCAGGAATTGGCGACCTTGGGCGGGCGCTTCGAACCCGGGCATTTCGATCTGGCACAGGT
CAACCGCGTGCTGGCGCGCGTGCGCGAGTAA

Upstream 100 bases:

>100_bases
TGCTGTTCGGTCTGCGCATGCGTCGCGGTGCCTGAGCTGCGCCTGCATTCGTCGGCCCGGCACGCCATACTCGCGGGCAG
GCAGCAACAAACACGACACG

Downstream 100 bases:

>100_bases
GGCATGCGCGCCTGATCGTGGAATGCGCTGAAAACCGCGGCTTTTGCGCGCCATTGCGGCCCGACCAGCGCCACTGCGGC
TTGACGCCCGATCGGTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTKAKKKATQQPVQAPVYQLHVALTGSAPLIWRRLLVSGAARLATLHRVLQPVMGWNNTHPYEFDLGVGRYGESGLDVPE
RPRLKHAGRVTLESALGQLESFDYFYGAGQGWQHRLQVEALLPPDAGLRVARCVEGVNACPPGSSGGIDDYQTLLQILAD
PDHAQHVQELATLGGRFEPGHFDLAQVNRVLARVRE

Sequences:

>Translated_196_residues
MTKAKKKATQQPVQAPVYQLHVALTGSAPLIWRRLLVSGAARLATLHRVLQPVMGWNNTHPYEFDLGVGRYGESGLDVPE
RPRLKHAGRVTLESALGQLESFDYFYGAGQGWQHRLQVEALLPPDAGLRVARCVEGVNACPPGSSGGIDDYQTLLQILAD
PDHAQHVQELATLGGRFEPGHFDLAQVNRVLARVRE
>Mature_195_residues
TKAKKKATQQPVQAPVYQLHVALTGSAPLIWRRLLVSGAARLATLHRVLQPVMGWNNTHPYEFDLGVGRYGESGLDVPER
PRLKHAGRVTLESALGQLESFDYFYGAGQGWQHRLQVEALLPPDAGLRVARCVEGVNACPPGSSGGIDDYQTLLQILADP
DHAQHVQELATLGGRFEPGHFDLAQVNRVLARVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 21516; Mature: 21385

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAKKKATQQPVQAPVYQLHVALTGSAPLIWRRLLVSGAARLATLHRVLQPVMGWNNTH
CCCHHHHHHHCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYEFDLGVGRYGESGLDVPERPRLKHAGRVTLESALGQLESFDYFYGAGQGWQHRLQVEA
CEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
LLPPDAGLRVARCVEGVNACPPGSSGGIDDYQTLLQILADPDHAQHVQELATLGGRFEPG
ECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
HFDLAQVNRVLARVRE
CCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKAKKKATQQPVQAPVYQLHVALTGSAPLIWRRLLVSGAARLATLHRVLQPVMGWNNTH
CCHHHHHHHCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYEFDLGVGRYGESGLDVPERPRLKHAGRVTLESALGQLESFDYFYGAGQGWQHRLQVEA
CEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
LLPPDAGLRVARCVEGVNACPPGSSGGIDDYQTLLQILADPDHAQHVQELATLGGRFEPG
ECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
HFDLAQVNRVLARVRE
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]