| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is gstA [H]
Identifier: 84623068
GI number: 84623068
Start: 1534715
End: 1535353
Strand: Direct
Name: gstA [H]
Synonym: XOO_1411
Alternate gene names: 84623068
Gene position: 1534715-1535353 (Clockwise)
Preceding gene: 84623067
Following gene: 84623069
Centisome position: 31.07
GC content: 66.2
Gene sequence:
>639_bases ATGTCCACCGTGCGTCCCCCGCTGACCGTCCATGGCATGTCCAGTTCCGGCAATTGCTACAAGGTGCGTTTGCTGCTGGA ACAACTGGTCAGCCGCTACCACTGGGTGGAGGTGGATAGCGTGGCCGGGCAGACCCGCACGCCCGCGTACCTGGCCAAGA ATCCCAACGGCAAGGTGCCGATGGTGGAACGCGACGACGGCCGCGTGTTGACCGAATCCAATGCGATCCTGTTCTGGCTG GCCGAAGGCACCCCGTATCTGCCCACCAATGCGTGGCAGCGCGCGCAGGCGCTGAGCTGGATGTTCTTCGAGCAATACAG CCATGAGCCGTCTGTGGCGATGGCGCGGTTCATCAGCCTGTGGACGCCGCGCGATGCCGCGCGCCGCGCCGAGCCGCCGC AGCTGCGTGTGCGCGGCGAGCAGGCGCTGGCCCTGATGGAACAGCATCTGCAGCAGCACGCCTGGTTCACCGGCAGCGAC TACGGCATCGCCGATATCGCGCTGTTCGCCTACACCCATTGCGCCGAAGACGGCCGTTTCGATCTGGAGCGCTGGCCGGC GATCACGGACTGGTTGCAACGCGTGCAGGCGCTGCCGCGCTTCGTGCCGATGCCGTCAGCTGCGTCGGTGACGGCATGA
Upstream 100 bases:
>100_bases AAGCGTGGCATCGGCGGGCCGCTGCTGCGTGCAGGGCTTTGCAAAGGCACGCCGGGCTGTGACACTGCCAGCCCCTTGTT GCTGCCGCGGAGCCAGCGAG
Downstream 100 bases:
>100_bases GCCGTGCGCGCGATGTGCCTGGCGCTGACGTCGGCATCGCTGCGTGCTTGGCGGACACTCGTCTTTGCTTTCTTCCATCG GCCTTCGCCATGCGCTTGCA
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSTVRPPLTVHGMSSSGNCYKVRLLLEQLVSRYHWVEVDSVAGQTRTPAYLAKNPNGKVPMVERDDGRVLTESNAILFWL AEGTPYLPTNAWQRAQALSWMFFEQYSHEPSVAMARFISLWTPRDAARRAEPPQLRVRGEQALALMEQHLQQHAWFTGSD YGIADIALFAYTHCAEDGRFDLERWPAITDWLQRVQALPRFVPMPSAASVTA
Sequences:
>Translated_212_residues MSTVRPPLTVHGMSSSGNCYKVRLLLEQLVSRYHWVEVDSVAGQTRTPAYLAKNPNGKVPMVERDDGRVLTESNAILFWL AEGTPYLPTNAWQRAQALSWMFFEQYSHEPSVAMARFISLWTPRDAARRAEPPQLRVRGEQALALMEQHLQQHAWFTGSD YGIADIALFAYTHCAEDGRFDLERWPAITDWLQRVQALPRFVPMPSAASVTA >Mature_211_residues STVRPPLTVHGMSSSGNCYKVRLLLEQLVSRYHWVEVDSVAGQTRTPAYLAKNPNGKVPMVERDDGRVLTESNAILFWLA EGTPYLPTNAWQRAQALSWMFFEQYSHEPSVAMARFISLWTPRDAARRAEPPQLRVRGEQALALMEQHLQQHAWFTGSDY GIADIALFAYTHCAEDGRFDLERWPAITDWLQRVQALPRFVPMPSAASVTA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=189, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=3e-17, Organism=Drosophila melanogaster, GI20130115, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24061; Mature: 23929
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVRPPLTVHGMSSSGNCYKVRLLLEQLVSRYHWVEVDSVAGQTRTPAYLAKNPNGKVP CCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCEEEEHHHCCCCCCCEEEEECCCCCCC MVERDDGRVLTESNAILFWLAEGTPYLPTNAWQRAQALSWMFFEQYSHEPSVAMARFISL EEECCCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WTPRDAARRAEPPQLRVRGEQALALMEQHLQQHAWFTGSDYGIADIALFAYTHCAEDGRF CCCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC DLERWPAITDWLQRVQALPRFVPMPSAASVTA CHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STVRPPLTVHGMSSSGNCYKVRLLLEQLVSRYHWVEVDSVAGQTRTPAYLAKNPNGKVP CCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCEEEEHHHCCCCCCCEEEEECCCCCCC MVERDDGRVLTESNAILFWLAEGTPYLPTNAWQRAQALSWMFFEQYSHEPSVAMARFISL EEECCCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WTPRDAARRAEPPQLRVRGEQALALMEQHLQQHAWFTGSDYGIADIALFAYTHCAEDGRF CCCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC DLERWPAITDWLQRVQALPRFVPMPSAASVTA CHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA