| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is zur [H]
Identifier: 84623052
GI number: 84623052
Start: 1522146
End: 1522652
Strand: Direct
Name: zur [H]
Synonym: XOO_1395
Alternate gene names: 84623052
Gene position: 1522146-1522652 (Clockwise)
Preceding gene: 84623051
Following gene: 84623053
Centisome position: 30.81
GC content: 65.48
Gene sequence:
>507_bases ATGACCAAGCACACCCACGCACCAGACCTCGCCTGCACCGCACCGCATCACCACGTCGACGACGCCAATGGCTTCGTGCG CGCGGTGGAGCGCGCCTGCAGCGAACGCGGCCTGCGGCTGACGCCCATCCGCGCCAACGTGCTGCGGCTGATCGCCGACG CCGGCAAACCGGTCAAGGCCTACGAACTGCTGGACTGGGTGCGCGAAGGCAAGGGCGTCGGTGCCGATGCACCGCCCACG GTGTACCGCGCGCTGGATTTCCTGATGGCCAATGGCTTCGTGCACAAGCTCGAATCGGTCAACGCTTTCGTCGCCTGCCA CCACCCCAACAGCGCTCAGCACTCGGTGCCGTTCCTGATCTGCGACCGTTGCCATAGCGCAGTGGAACTGGAAGACCACG ACGTCGTGTTGCAACTGGAAGCCCGCGCCAAGGCGCTCGGTTTCCAGCCGCAGGCGCAGACGCTGGAAGTGCATGGGTTA TGCGCGAAGTGCGCGGTAGTGGAGTAA
Upstream 100 bases:
>100_bases GATATTTCGCAAACGGTGTACCTGGCCGGACGCGAGGGTGCCTTGAAACGCATCGATGCGGCACTTACCAAGATTGGCGC GGCCTGACGCCGGAGCCCGT
Downstream 100 bases:
>100_bases GGCGTTGCGAGGTCGTGCCTAGAGCGCGGCCTGTTTCAAGGCACTCGTGGCGCAACGCGCGGGTTCTGGTATGCGATTGC ACACGGGCTGGAGAGCTGCC
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTKHTHAPDLACTAPHHHVDDANGFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGADAPPT VYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDHDVVLQLEARAKALGFQPQAQTLEVHGL CAKCAVVE
Sequences:
>Translated_168_residues MTKHTHAPDLACTAPHHHVDDANGFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGADAPPT VYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDHDVVLQLEARAKALGFQPQAQTLEVHGL CAKCAVVE >Mature_167_residues TKHTHAPDLACTAPHHHVDDANGFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGADAPPTV YRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDHDVVLQLEARAKALGFQPQAQTLEVHGLC AKCAVVE
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=139, Percent_Identity=43.8848920863309, Blast_Score=117, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18339; Mature: 18208
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHTHAPDLACTAPHHHVDDANGFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKA CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHH YELLDWVREGKGVGADAPPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEE CDRCHSAVELEDHDVVLQLEARAKALGFQPQAQTLEVHGLCAKCAVVE ECCCCCCCEECCCCEEEEEECHHHHCCCCCCCCEEEECCHHHHHEECC >Mature Secondary Structure TKHTHAPDLACTAPHHHVDDANGFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKA CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHH YELLDWVREGKGVGADAPPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEE CDRCHSAVELEDHDVVLQLEARAKALGFQPQAQTLEVHGLCAKCAVVE ECCCCCCCEECCCCEEEEEECHHHHCCCCCCCCEEEECCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]