| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623050
Identifier: 84623050
GI number: 84623050
Start: 1520013
End: 1520660
Strand: Direct
Name: 84623050
Synonym: XOO_1393
Alternate gene names: NA
Gene position: 1520013-1520660 (Clockwise)
Preceding gene: 84623049
Following gene: 84623051
Centisome position: 30.77
GC content: 65.74
Gene sequence:
>648_bases GTGCGTGAAGCCGCCGACGGGCGCCGCTCACTTCGCCTCAAGGGCGATGCCAAACACAACCAGCTCACCGACCTGCTGGC CGACGATCCGCATTTCGGCCCGTTCCTGAAGATTCCCGGCAAGGACAACGGCTTCGATATCGAAGGCATCGTGGTCGATG GTCAACGCTTGCTGCTGGGCCTGCGCGGGCCGGTGCTGCGTGGTTGGTCGGCGATGCTGGAGATCCAGGTGGAAGCGCAT GGCGACCATCTGCGCCTGATGCCGTTGGACGATGACGGCACGCTGCTGCGGAAACACTTCCTGCAACTGGGCGGGCTGGG GATTTGCGATCTGCATTATTCCGGCGACGATCTGTACCTGCTGGCCGGACCGACAATGGTGCTGAATTGCGAGATTCGCC TGTTCAAATGGCCGGGTGCGCGCACGGTGCTGGCCGCGGACCAGGCGCCGGTGCGTTTTCAGCATGACCTGCTGGAATCG GCGGTGCTGCCACACGGCAAGGACAGCGACCGCGCGGAGGCCATCTGCAACCTGCCCAAGCCGCTGGCCTGCAAGGTTCC CACCTGGCTGGTGCTGTATGACGCCCCGGGCGCGGCCCGCCGCGGCGGCGAGGGCGTGGTGTACGGCGACCTGTTGCGCA ACCGCTGA
Upstream 100 bases:
>100_bases CCAAACGCCTGACCAAGTTGAAGCTCGATGGCAACCGCCGTCTGCTGGCCTGCCTGCCTGCCTGCCGATCGAACAGGCGC AAGACGGCAGCCCGCACCTG
Downstream 100 bases:
>100_bases GCCGCGGGCCGGGCAGGGCCTCGCTGCGCAAGGTAAAATCGGCGCACTCCCGTTTTGTCGAGCGCTCCATGGCCTGCCGC ACCCGTTTTGCCCCCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MREAADGRRSLRLKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSAMLEIQVEAH GDHLRLMPLDDDGTLLRKHFLQLGGLGICDLHYSGDDLYLLAGPTMVLNCEIRLFKWPGARTVLAADQAPVRFQHDLLES AVLPHGKDSDRAEAICNLPKPLACKVPTWLVLYDAPGAARRGGEGVVYGDLLRNR
Sequences:
>Translated_215_residues MREAADGRRSLRLKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSAMLEIQVEAH GDHLRLMPLDDDGTLLRKHFLQLGGLGICDLHYSGDDLYLLAGPTMVLNCEIRLFKWPGARTVLAADQAPVRFQHDLLES AVLPHGKDSDRAEAICNLPKPLACKVPTWLVLYDAPGAARRGGEGVVYGDLLRNR >Mature_215_residues MREAADGRRSLRLKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSAMLEIQVEAH GDHLRLMPLDDDGTLLRKHFLQLGGLGICDLHYSGDDLYLLAGPTMVLNCEIRLFKWPGARTVLAADQAPVRFQHDLLES AVLPHGKDSDRAEAICNLPKPLACKVPTWLVLYDAPGAARRGGEGVVYGDLLRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23653; Mature: 23653
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAADGRRSLRLKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLG CCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEE LRGPVLRGWSAMLEIQVEAHGDHLRLMPLDDDGTLLRKHFLQLGGLGICDLHYSGDDLYL CCCCHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEE LAGPTMVLNCEIRLFKWPGARTVLAADQAPVRFQHDLLESAVLPHGKDSDRAEAICNLPK EECCEEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC PLACKVPTWLVLYDAPGAARRGGEGVVYGDLLRNR CCEECCCEEEEEECCCCCCCCCCCEEEEHHHHCCC >Mature Secondary Structure MREAADGRRSLRLKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLG CCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEE LRGPVLRGWSAMLEIQVEAHGDHLRLMPLDDDGTLLRKHFLQLGGLGICDLHYSGDDLYL CCCCHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEE LAGPTMVLNCEIRLFKWPGARTVLAADQAPVRFQHDLLESAVLPHGKDSDRAEAICNLPK EECCEEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC PLACKVPTWLVLYDAPGAARRGGEGVVYGDLLRNR CCEECCCEEEEEECCCCCCCCCCCEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA