| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623020
Identifier: 84623020
GI number: 84623020
Start: 1485806
End: 1486363
Strand: Direct
Name: 84623020
Synonym: XOO_1363
Alternate gene names: NA
Gene position: 1485806-1486363 (Clockwise)
Preceding gene: 84623019
Following gene: 84623021
Centisome position: 30.08
GC content: 68.64
Gene sequence:
>558_bases GTGGCACGCGGCTGCAACGCGCCGCGTGCTGCGTTGAATGGAAGCGGTGCGCGTGAGCGCGATGCGCGCCTGGCGCTGAT GTGCAGGCCAGACATGATGTCCGGCAAACGTAAAACGCGGCAAATGACGGCTATTTGGAGCGGCTACAACACGTCGCGAG CAGCTGTCGGGTTGGCGCGGACGGCGCGCAGTAACCGCAGTGGACGCGTTGTACATGCCGATTCCGAGCACCCGCCGCGC CCGCCGCGCCCGCCTGGCGGTGAGCGCAGTCGTGTTGTTGGCCGCTCTTCCTGTCGTGCGTATCTGGTGACGCTGGGCGC GCTGGTTGCAGCAGGCAGCGGCTGCGTCGCCCTGGCCGCTGGCGATATCGCAGGCGCCGGGCTGGCGCTGCTGGTCTGCG CGCTGGGCGTGCTGCTGCTGGGGTTCGGCGTCGTCGGGCCGACGCGACAGATGGAAGCATTGGCCGATGCGACATCCGGG CACAAGGCCGCCCTGGTGCTGATGGTGCTGGCGTCTCCGGTGTACCTGTTGATGGCGCCGTTCTACGCGCGGCGGTGA
Upstream 100 bases:
>100_bases CCAAGCGTGCGGCCGAGGCAGTAGCCAACCAGGGCAAGGCGAAGTAAACGCCGCTGATGGTTGCAGCGCTGCGTGCGTCG CGCGCAGCGCCTGTCTTCGT
Downstream 100 bases:
>100_bases CTGCATGCGGTGGCGCGCGCTGCGCCGGGATGCGGATGTTGATTGAAGCGGTGTGTCGTGGCGTCGGTGACAGACGCGCA CGCAGCGTGTGGTTGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MARGCNAPRAALNGSGARERDARLALMCRPDMMSGKRKTRQMTAIWSGYNTSRAAVGLARTARSNRSGRVVHADSEHPPR PPRPPGGERSRVVGRSSCRAYLVTLGALVAAGSGCVALAAGDIAGAGLALLVCALGVLLLGFGVVGPTRQMEALADATSG HKAALVLMVLASPVYLLMAPFYARR
Sequences:
>Translated_185_residues MARGCNAPRAALNGSGARERDARLALMCRPDMMSGKRKTRQMTAIWSGYNTSRAAVGLARTARSNRSGRVVHADSEHPPR PPRPPGGERSRVVGRSSCRAYLVTLGALVAAGSGCVALAAGDIAGAGLALLVCALGVLLLGFGVVGPTRQMEALADATSG HKAALVLMVLASPVYLLMAPFYARR >Mature_184_residues ARGCNAPRAALNGSGARERDARLALMCRPDMMSGKRKTRQMTAIWSGYNTSRAAVGLARTARSNRSGRVVHADSEHPPRP PRPPGGERSRVVGRSSCRAYLVTLGALVAAGSGCVALAAGDIAGAGLALLVCALGVLLLGFGVVGPTRQMEALADATSGH KAALVLMVLASPVYLLMAPFYARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19224; Mature: 19093
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGCNAPRAALNGSGARERDARLALMCRPDMMSGKRKTRQMTAIWSGYNTSRAAVGLAR CCCCCCCCCHHCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHH TARSNRSGRVVHADSEHPPRPPRPPGGERSRVVGRSSCRAYLVTLGALVAAGSGCVALAA HHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCEEEEEC GDIAGAGLALLVCALGVLLLGFGVVGPTRQMEALADATSGHKAALVLMVLASPVYLLMAP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FYARR HHHCC >Mature Secondary Structure ARGCNAPRAALNGSGARERDARLALMCRPDMMSGKRKTRQMTAIWSGYNTSRAAVGLAR CCCCCCCCHHCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHH TARSNRSGRVVHADSEHPPRPPRPPGGERSRVVGRSSCRAYLVTLGALVAAGSGCVALAA HHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCEEEEEC GDIAGAGLALLVCALGVLLLGFGVVGPTRQMEALADATSGHKAALVLMVLASPVYLLMAP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FYARR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA