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The map label for this gene is hslR [H]

Identifier: 84622881

GI number: 84622881

Start: 1333695

End: 1334102

Strand: Direct

Name: hslR [H]

Synonym: XOO_1224

Alternate gene names: 84622881

Gene position: 1333695-1334102 (Clockwise)

Preceding gene: 84622879

Following gene: 84622882

Centisome position: 27.0

GC content: 65.2

Gene sequence:

>408_bases
ATGAATCTGGAATTGGAACAGGCGACAACGGTCAGGCTGGATGTCTGGCTGTGGGCAGCGCGCTTTTTCAAGACGCGCAG
CCTGGCCAAGAACGCAGTGGAAACCGGCAAGGTAGACGTGGCCGGACAGCGTCCCAAGCCGTCGCGCACGCTGCGCAGCG
GCGAGCAGTTGCGTATCGACCGCGGTGGGGAAATCTTCGAGATCACCGTTGCTGCGCTCAGCGCTGTGCGCGGCGCGGCA
CCGGTCGCACAGGCGCTTTATGTCGAAAGCGACAGCTCGCGCGAGGCCCGCGCGCAATGGCGCCTGCAGCGCGCTGCCGA
GCGCACGGGCTATCGTGCGCCCGAGGGTAAACCGGACAAGCGTGCGCGCCGGCTGATTACGGCCTTGGGCGATATCGATG
CGTTTTAG

Upstream 100 bases:

>100_bases
CCACGCCGGCAGTCATGTTGGCGTTCCCGAGATCGCAGTGTTTGCGCGCATCCCACGGTGTGCTGCGCGAGCCAACGCAC
GACACGAGACCGCAAGACGC

Downstream 100 bases:

>100_bases
CGCACTGTCGCAACAGGCTGTCATGCAATAGACCCGCAAACGCAAACGCCCCGGTGATTCGGGGCGTTTGTATTACCTGG
CACACGCACCTGCGTGTTGG

Product: heat shock protein 15-like protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNLELEQATTVRLDVWLWAARFFKTRSLAKNAVETGKVDVAGQRPKPSRTLRSGEQLRIDRGGEIFEITVAALSAVRGAA
PVAQALYVESDSSREARAQWRLQRAAERTGYRAPEGKPDKRARRLITALGDIDAF

Sequences:

>Translated_135_residues
MNLELEQATTVRLDVWLWAARFFKTRSLAKNAVETGKVDVAGQRPKPSRTLRSGEQLRIDRGGEIFEITVAALSAVRGAA
PVAQALYVESDSSREARAQWRLQRAAERTGYRAPEGKPDKRARRLITALGDIDAF
>Mature_135_residues
MNLELEQATTVRLDVWLWAARFFKTRSLAKNAVETGKVDVAGQRPKPSRTLRSGEQLRIDRGGEIFEITVAALSAVRGAA
PVAQALYVESDSSREARAQWRLQRAAERTGYRAPEGKPDKRARRLITALGDIDAF

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=117, Percent_Identity=41.025641025641, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15023; Mature: 15023

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLELEQATTVRLDVWLWAARFFKTRSLAKNAVETGKVDVAGQRPKPSRTLRSGEQLRID
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCEEEEC
RGGEIFEITVAALSAVRGAAPVAQALYVESDSSREARAQWRLQRAAERTGYRAPEGKPDK
CCCCEEEHHHHHHHHHHCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
RARRLITALGDIDAF
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLELEQATTVRLDVWLWAARFFKTRSLAKNAVETGKVDVAGQRPKPSRTLRSGEQLRID
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCEEEEC
RGGEIFEITVAALSAVRGAAPVAQALYVESDSSREARAQWRLQRAAERTGYRAPEGKPDK
CCCCEEEHHHHHHHHHHCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
RARRLITALGDIDAF
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]