| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622805
Identifier: 84622805
GI number: 84622805
Start: 1253265
End: 1254347
Strand: Direct
Name: 84622805
Synonym: XOO_1148
Alternate gene names: NA
Gene position: 1253265-1254347 (Clockwise)
Preceding gene: 84622804
Following gene: 84622806
Centisome position: 25.37
GC content: 67.13
Gene sequence:
>1083_bases ATGATCATCGTTGAACGGCTGTTCCGTGTCCTGCGGCGCCATGTGCGCCGCGTCAGCTGGGGCATGGTGACGCTGGCACT GCTTGCGCACATGGGCTTGAGCTGGGTGTTGCTGCTGTGGGCCGGCGAGCAGAAGCGCGTTGGCCTGGACGCGTTTGCGT ACTACTACATGACCACCGCCACCACCATCGGCGACGGCGATCTGTCGCCGGGCTCGGTGGCCGGGCGCTCTCTCGCTGCG TTCGTGTTGATGTCGGGTGCGATGGCGTTGTTCACCACGGTGCTGGCCAAGACCAGCGGCGTGCGCATCACTGTCTGGAG GCGCCACCACATGGGCAAGATGGCCTATGCCGATCTGCGCGGGCACACCATTCTGATCGGCTGGCAGGGCGCGGCCTCCA CGCGCTTGCTGGAGTTGCTGCTCTCCGATACCGCCACCGATGACGAAGGCGTAGTGCTGATCGCCGAGGGCGTGGCGGGA AACCCGCTGCCCGACCACATGCGCTTCATCGCTGCCGAGTCGTACACGCACACCGAGGTGTACCTGCGCGCCGGCATTAC CGGCGCCGCGCGTGTCATCGTCAATCTGCCCTCCGACGACCAGACCCTGGCGTCGGTGTTCGCGTTGATGGCGCATGCAC CGGCCGCACACATCGTGGCGCACTTCGATTCGGCCAGCGCGGCGCGCTTGGTCAACTGCCATTACCCGGCCATTGAGTGC GCGCGCCCGATGACCGCCGAGATCCTGGCCCGCGCGGCGCAGGATCCGGGCAGCGCGGCGATCACCGCCGAGCTGCTATC GGTAGACGATGGCCCCACCCAGTTCAGTCGTGCCGCGCCTGCGAATGCGCAACCACTGGATGACAGCCGGCTTGCGGCCG ATTTCAACCAACGCGGCACATTGTTGCTGGGCCTGCGCGCGCCCGATGGCGCATTGCGCTTGAACCCGCCAGCACGCATC GCTGTCGCCGCCGGTGCCATGCTGTCTTACCTGGCCGAGCAGCGCGTGCCGGCGCACGCCATCGCGTGGCAGGCCGTGCG CAGCGAGGCGTCCCCCATGTCCCCATCGCTACAAGGTGTATGA
Upstream 100 bases:
>100_bases GAGAACACCAGCGGCAGCGCGCCGTTGATCGGCCAGGTGCGCGACGTGCAGCAGGTTCCGCGCAGCGACAGCTGATCCAT CGCACGGCACAGGATGCGCC
Downstream 100 bases:
>100_bases CGATGCATTTTTTCAGCAAATTGTTCGGCCAACCGCAACCGCCGCCGCTGCCTACTTCCAGTCGTGGCGCGATCGATCAC ACGCTGCCGCTGGGCTTGCG
Product: potassium channel related protein
Products: NA
Alternate protein names: Potassium Channel Related Protein; Ion Transport 2 Domain-Containing Protein; Potassium Channel-Like Protein; Voltage-Gated Ion Channel Superfamily Protein; Cation Transporter Protein; Ion Channel Protein; Resembles Potassium Channels; Transmembrane Cation Transporter; Ion Transport 2 Domain Protein
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MIIVERLFRVLRRHVRRVSWGMVTLALLAHMGLSWVLLLWAGEQKRVGLDAFAYYYMTTATTIGDGDLSPGSVAGRSLAA FVLMSGAMALFTTVLAKTSGVRITVWRRHHMGKMAYADLRGHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAEGVAG NPLPDHMRFIAAESYTHTEVYLRAGITGAARVIVNLPSDDQTLASVFALMAHAPAAHIVAHFDSASAARLVNCHYPAIEC ARPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSRAAPANAQPLDDSRLAADFNQRGTLLLGLRAPDGALRLNPPARI AVAAGAMLSYLAEQRVPAHAIAWQAVRSEASPMSPSLQGV
Sequences:
>Translated_360_residues MIIVERLFRVLRRHVRRVSWGMVTLALLAHMGLSWVLLLWAGEQKRVGLDAFAYYYMTTATTIGDGDLSPGSVAGRSLAA FVLMSGAMALFTTVLAKTSGVRITVWRRHHMGKMAYADLRGHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAEGVAG NPLPDHMRFIAAESYTHTEVYLRAGITGAARVIVNLPSDDQTLASVFALMAHAPAAHIVAHFDSASAARLVNCHYPAIEC ARPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSRAAPANAQPLDDSRLAADFNQRGTLLLGLRAPDGALRLNPPARI AVAAGAMLSYLAEQRVPAHAIAWQAVRSEASPMSPSLQGV >Mature_360_residues MIIVERLFRVLRRHVRRVSWGMVTLALLAHMGLSWVLLLWAGEQKRVGLDAFAYYYMTTATTIGDGDLSPGSVAGRSLAA FVLMSGAMALFTTVLAKTSGVRITVWRRHHMGKMAYADLRGHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAEGVAG NPLPDHMRFIAAESYTHTEVYLRAGITGAARVIVNLPSDDQTLASVFALMAHAPAAHIVAHFDSASAARLVNCHYPAIEC ARPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSRAAPANAQPLDDSRLAADFNQRGTLLLGLRAPDGALRLNPPARI AVAAGAMLSYLAEQRVPAHAIAWQAVRSEASPMSPSLQGV
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38433; Mature: 38433
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVERLFRVLRRHVRRVSWGMVTLALLAHMGLSWVLLLWAGEQKRVGLDAFAYYYMTTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHHHHHE TTIGDGDLSPGSVAGRSLAAFVLMSGAMALFTTVLAKTSGVRITVWRRHHMGKMAYADLR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECC GHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAEGVAGNPLPDHMRFIAAESYTHTEV CCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEE YLRAGITGAARVIVNLPSDDQTLASVFALMAHAPAAHIVAHFDSASAARLVNCHYPAIEC EEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEEECCCCHHHH ARPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSRAAPANAQPLDDSRLAADFNQRGT CCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCC LLLGLRAPDGALRLNPPARIAVAAGAMLSYLAEQRVPAHAIAWQAVRSEASPMSPSLQGV EEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIIVERLFRVLRRHVRRVSWGMVTLALLAHMGLSWVLLLWAGEQKRVGLDAFAYYYMTTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHHHHHE TTIGDGDLSPGSVAGRSLAAFVLMSGAMALFTTVLAKTSGVRITVWRRHHMGKMAYADLR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECC GHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAEGVAGNPLPDHMRFIAAESYTHTEV CCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEE YLRAGITGAARVIVNLPSDDQTLASVFALMAHAPAAHIVAHFDSASAARLVNCHYPAIEC EEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEEECCCCHHHH ARPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSRAAPANAQPLDDSRLAADFNQRGT CCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCC LLLGLRAPDGALRLNPPARIAVAAGAMLSYLAEQRVPAHAIAWQAVRSEASPMSPSLQGV EEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA