| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is yiiG [C]
Identifier: 84622769
GI number: 84622769
Start: 1208270
End: 1208674
Strand: Direct
Name: yiiG [C]
Synonym: XOO_1112
Alternate gene names: 84622769
Gene position: 1208270-1208674 (Clockwise)
Preceding gene: 84622768
Following gene: 84622770
Centisome position: 24.46
GC content: 66.17
Gene sequence:
>405_bases ATGCAGGACCCGCAGGCCGGACCCACCGGCAAGGAACGCGGCATTCGTGCGCCGGGCACGGTGCTGTCGCATCGGGTCGA GGCATGCGGTGCGCCGATGACCGCCGCGTTGGTACAGCAACCGGTCAACGCCGAGCTCGACCCGGTCGCCAGGACGTATC AGGAACGCTTCGCCACGCTCAATGAGCGTATCGGGGAGGCGGTGCGCTACGACGGCCGCGAGGATTATCTACGCGACGAC GGCAAGGGCCTGCGCGCACTGCACGCACCGCTGATGCAAGCCTATGCCGCTTTCTTCGAAGCCGCTGAAGCGATGAACGC AGCGTTGGAACACAGCGAAGACACGCGGCGCAAGGCGCAGATCGATGCGATCGAAAAAGCGCAGGGCCACAGCGCAGCGC GGTAG
Upstream 100 bases:
>100_bases CGCCGCCGTGGAAGGCGCCGACAAGATCAATGCGTACATTGCCTGTTTCAATGATGTCGGACAGCCGCTACATGAGAGTT AGCAGACCTACATCGGCTGG
Downstream 100 bases:
>100_bases CACCTGAAGATCATCGGCGAGGGCAGGCAGCTGGTGAAGGTGCTCGACCGCGACACGCCGGATCTTGCCGCAGTGCAAGC GCAATTGGCCAACTACCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MQDPQAGPTGKERGIRAPGTVLSHRVEACGAPMTAALVQQPVNAELDPVARTYQERFATLNERIGEAVRYDGREDYLRDD GKGLRALHAPLMQAYAAFFEAAEAMNAALEHSEDTRRKAQIDAIEKAQGHSAAR
Sequences:
>Translated_134_residues MQDPQAGPTGKERGIRAPGTVLSHRVEACGAPMTAALVQQPVNAELDPVARTYQERFATLNERIGEAVRYDGREDYLRDD GKGLRALHAPLMQAYAAFFEAAEAMNAALEHSEDTRRKAQIDAIEKAQGHSAAR >Mature_134_residues MQDPQAGPTGKERGIRAPGTVLSHRVEACGAPMTAALVQQPVNAELDPVARTYQERFATLNERIGEAVRYDGREDYLRDD GKGLRALHAPLMQAYAAFFEAAEAMNAALEHSEDTRRKAQIDAIEKAQGHSAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14631; Mature: 14631
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDPQAGPTGKERGIRAPGTVLSHRVEACGAPMTAALVQQPVNAELDPVARTYQERFATL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH NERIGEAVRYDGREDYLRDDGKGLRALHAPLMQAYAAFFEAAEAMNAALEHSEDTRRKAQ HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IDAIEKAQGHSAAR HHHHHHHCCCCCCC >Mature Secondary Structure MQDPQAGPTGKERGIRAPGTVLSHRVEACGAPMTAALVQQPVNAELDPVARTYQERFATL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH NERIGEAVRYDGREDYLRDDGKGLRALHAPLMQAYAAFFEAAEAMNAALEHSEDTRRKAQ HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IDAIEKAQGHSAAR HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA