Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84622711

Identifier: 84622711

GI number: 84622711

Start: 1149177

End: 1150235

Strand: Direct

Name: 84622711

Synonym: XOO_1054

Alternate gene names: NA

Gene position: 1149177-1150235 (Clockwise)

Preceding gene: 84622708

Following gene: 84622712

Centisome position: 23.26

GC content: 62.13

Gene sequence:

>1059_bases
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCTACTGCTGTGAAGCTCTTGCAGCTATC
GCGCAGCGGGAACCGTTTTCGCGTGGAACATTACGTCGTGGAACCATTGCCGCCGAACGCGGTGGTGGAAAAGAACATCG
TCGAAGTGGAGGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCCGCTGCC
GTGGCTGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACATGGAGGCTCAGGTCGA
ACTGGAAGCCACCAATTACATTCCCTACCCGATCGAGGAAGTGAATCTCGATTTCGAGGTGCTGGGCCCAATGCCCAACA
GCCCGGATATGGTCCAGGTGCTGCTGGCCGCATCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGT
GGTCTGACTGCCAAAGTGATGGACGTGGAGGCCTTCGCGGTCGAAAACGCCTTCGCCCTGGTCGCCAGCGAATTGCCGGT
GGCCGCTGACGCAGTCGTGGCGCTGGTGGATATCGGCGCCACCATGACCACGCTGAGCGTGCTGCGTTCCGGTCGCAGTC
TGTATAGCCGCGAACAGATGTTCGGCGGCAAGCAGCTCACCGATGAAGTGATGCGCCGTTACGGACTCACCTACGAAGAA
GCTGGCCTGGCCAAGCGTCAGGGCGGTCTGCCGGAAAGCTACGAGGTCGAGGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGGTTGCTGCAGTTCTTCTATGCAGGCAGCGAGTTCAATCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAACTGGGCGTCACCACCGTGGTCGCCAACCCGCTTGCC
CAGATGACGCTGGGTCCGAAGGTCCAGGCCCATGTGCTGGCGCTGGATGCGCCTGCATTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Upstream 100 bases:

>100_bases
TCATTGCCTAGCGCGTGAAGGGCTTGTCAACTGTTAAAATTTGATTGTTAATACGAAGGCGCAGACATGCGTCCAAGTGC
CCGTCGGCAGGGGAGTTACC

Downstream 100 bases:

>100_bases
TGGCAAGAATCAATCTATTGCCCTGGCGCGCGGAGCGCCGAAAGGCACGCGAGCGCGAGTTCTATTCGATGCTGGGCTTC
GCCGCATTGGGCGGGCTGCT

Product: fimbrial assembly membrane protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pili Biogenesis Protein PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Protein FtsA; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYVVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDMEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQMFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHVLALDAPALMIATGLALRSFD

Sequences:

>Translated_352_residues
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYVVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDMEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQMFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHVLALDAPALMIATGLALRSFD
>Mature_351_residues
GLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYVVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAAV
AGSAVITKLIPMPADLDDSDMEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGG
LTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQMFGGKQLTDEVMRRYGLTYEEA
GLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLAQ
MTLGPKVQAHVLALDAPALMIATGLALRSFD

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37713; Mature: 37582

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYVVEPLPPNAVVEKNIVEVEAVG
CCCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHH
EAIRRAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDMEAQVELEATNYIPYPIEE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
VNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLTAKVMDVEAFAVENAFAL
CCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH
VASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQMFGGKQLTDEVMRRYGLTYEE
HHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALAR
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHH
LPEMVEEQLGVTTVVANPLAQMTLGPKVQAHVLALDAPALMIATGLALRSFD
HHHHHHHHCCEEHHHHCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYVVEPLPPNAVVEKNIVEVEAVG
CCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHH
EAIRRAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDMEAQVELEATNYIPYPIEE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
VNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLTAKVMDVEAFAVENAFAL
CCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH
VASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQMFGGKQLTDEVMRRYGLTYEE
HHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALAR
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHH
LPEMVEEQLGVTTVVANPLAQMTLGPKVQAHVLALDAPALMIATGLALRSFD
HHHHHHHHCCEEHHHHCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA