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The map label for this gene is yjgF [C]

Identifier: 84622704

GI number: 84622704

Start: 1139759

End: 1140139

Strand: Direct

Name: yjgF [C]

Synonym: XOO_1047

Alternate gene names: 84622704

Gene position: 1139759-1140139 (Clockwise)

Preceding gene: 84622703

Following gene: 84622705

Centisome position: 23.07

GC content: 64.57

Gene sequence:

>381_bases
ATGCCCCAGATCATCCATACCGACCAGGCGCCTGCTGCCATCGGCCCATATTCGCAGGCCGTGCGTGCCGGCAACACGGT
GTATTTCTCAGGGCAGATCCCGCTGGATCCGGTCACTGGCGAAATCGTGCCAGGCGACATCGGCGCGCAGGCGCGGCGTG
CGTTCGACAACCTCAAGGCCGTGGCCGAAGCGGCCGGTGGCTCGCTCGACAAGATCGTGCGGTTGGGCCTGTATCTCACC
GACTTGGGTCAGTTCGCTGCCGTCAACGCGGTGATGCAGGAGTATTTCCAGGCCCCGTTCCCCGCACGCTCCACCATCGA
AGTGTCTGGCCTGCCCAAGGGCGCCGGTTTCGAAGTCGACGCGGTGATGGTGCTCGAGTGA

Upstream 100 bases:

>100_bases
CAGAGCGTGGGGCGGCAGTAGCGCCTGGCACGCTCGCGCAACAGTCGAGCAAATCCGCACAAAGGCCTAAACTGCTGCAA
CCCTTTGCAGTGGAGTCTCC

Downstream 100 bases:

>100_bases
TCCTGCGCGACTGATCCGCCATGCCGCGCGCGCGCGTCGTCACACCGAGCCTGGCCGTTGCCGGCCAGGCTCCGCTGTCC
AGCCTGCCTGGTGTCGGCCC

Product: translation initiation inhibitor

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPVTGEIVPGDIGAQARRAFDNLKAVAEAAGGSLDKIVRLGLYLT
DLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVDAVMVLE

Sequences:

>Translated_126_residues
MPQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPVTGEIVPGDIGAQARRAFDNLKAVAEAAGGSLDKIVRLGLYLT
DLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVDAVMVLE
>Mature_125_residues
PQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPVTGEIVPGDIGAQARRAFDNLKAVAEAAGGSLDKIVRLGLYLTD
LGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVDAVMVLE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=122, Percent_Identity=40.9836065573771, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI87082396, Length=127, Percent_Identity=49.6062992125984, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=45.6692913385827, Blast_Score=117, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=46.7213114754098, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71982075, Length=122, Percent_Identity=46.7213114754098, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=46.7213114754098, Blast_Score=115, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6322138, Length=120, Percent_Identity=38.3333333333333, Blast_Score=92, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6320899, Length=102, Percent_Identity=37.2549019607843, Blast_Score=88, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921376, Length=120, Percent_Identity=41.6666666666667, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13218; Mature: 13087

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPVTGEIVPGDIGAQARRAFDNLKA
CCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
VAEAAGGSLDKIVRLGLYLTDLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEE
AVMVLE
EEEEEC
>Mature Secondary Structure 
PQIIHTDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPVTGEIVPGDIGAQARRAFDNLKA
CCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
VAEAAGGSLDKIVRLGLYLTDLGQFAAVNAVMQEYFQAPFPARSTIEVSGLPKGAGFEVD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEE
AVMVLE
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2722750 [H]