| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621970
Identifier: 84621970
GI number: 84621970
Start: 341252
End: 342733
Strand: Direct
Name: 84621970
Synonym: XOO_0313
Alternate gene names: NA
Gene position: 341252-342733 (Clockwise)
Preceding gene: 84621969
Following gene: 84621971
Centisome position: 6.91
GC content: 65.45
Gene sequence:
>1482_bases ATGGCCCACACCCAGAACGCCGACTTCTTCCGGCAGCCCTTGGCCGAGATGATCGATCCGCGCCACCCGCTGGCGGTGCT GGCCCGTCGGCTGCCCTGGGCGCAGATCGAGGCGGTGTTGGCGCCGCATTTCGCTCGCAAGGTGCGCGCAGGTCGCGCGG TGGCGCAACACGATCTGTTCGGCCCCTCGGTGCAAGTGGCCGGTGCCGGTATTGCCGCTGCCGGCCGCCCACGCCTTCCC ATTCGCTTGATGGCCAGCCTGTTGGACCTGAAGCACGCTTACAAGCTCAGCGACGAGGAACTGGTGGAGCGCTGGGCCGA GAACGTGGTCTGGCAGCACTTCAGCGGCATGGCGTTCTATGAGCCGCGCCTGCCCTGCGATGCCACGCAGGTCGGGCGTT TTCGCGCGGCCATCGGTGAGGCCGGGGTCGAGGAACTGCTCAAGGCCACCATCGACACCGCGGTGTCCTCCAAGGCCATC GTGCCCGCCGAGTTCGAACGGCTGATCGTGGACACCATCGTGCAGGAGAAGGCCATTGCTCATCCGGTGGATTGGCGCCT GATGGAGAACGCGCGGCACAAGCTGGTGGTGGCGGCCAAGCGCGCGGGCATCGCGCTCAAGCAGACCTTCGCCAAAGAAA CCAAGACGCTGCGGCGCAAAGCCGGCGGCTACGCCCATGCCAGGCAGTTCAAGCGCCTGCGCAAGGTCCTCAAACGCCAG CGCACGCTCCTGGGCATCGTACTGCGCGAGGTGCAGCGCAAGATCGGGCAAGCCAGCCAGGCCACGGCGCCGGCGCCGGC GCTGGAGAATCTGCACACGCTGATGCAGCGCGCCGAGCGCATCCATGCTCAGCAACCCAATGGCAAGAACAAACTCTATG CCCTGCACGCGCCCGAAGTGGAGTGCATCGGCAAGGGCAAGGCGCGCAAGCCCTACGAGTTCGGGGTGAAGGTCAGCGTG GCCATCACGCACAAACAGGGCCTGATGGTCGGCGCGCGCAGCTTCACCGGCACCCCCTATGACGGCCACACGTTGCACGA GCAACTGGAGCAGGCCCGGATCCTGAGCGAGGACACAGCAGGCGCACCTAAACAGGTGGTGGTGGACCTGGGCTTTCGCG GTGTGGATGCGGCCAATCCCGGCGTTGAGATCATCCACCGGGGCACGTTCAAACGCCTGACAGATGAGCAGCGCCGCTGG CTGAAGCGACGCCAAGCGGAGGAGCCGGCCATCGGACACTTGAAGCACGACAACGGCATGGATCGGTGCTGGTTGCAAGG AGCGAACGGCGATGCGCTGCACGCAGTGCTGTGCGCGGCGGGGGACAACATCCGCTGGTTGCTGCGGGCCATGGTGCGTC TGGGACTGAAGGGTCTTTTTGCGCCTATGGTTGCGAGACTCATCATGCTGGCCACAGTGCTCGCAATGTCATTGCGAGCG AGGAACACACGCCCACATCGGTTGGCTTGGTGTGTTTGGTGA
Upstream 100 bases:
>100_bases CCCCGCGACCCCGCATGAACACAGGGTTTGCGGCGTTACAGCAGGGGCGCCGATCCCTCACAGTTGGTCTATCAGCATCT GATTCCTGGGAGTTTTACCG
Downstream 100 bases:
>100_bases ATTTTGCAGGGGCGACGAAGTAGCCCCTTGCCCCAAAGTGCTGACCGACAAAATTCCGCTTGCGCTCTGCATATATCCGA GCAAGATGAATGGCGCTTTT
Product: ISXoo5 transposase
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MAHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARKVRAGRAVAQHDLFGPSVQVAGAGIAAAGRPRLP IRLMASLLDLKHAYKLSDEELVERWAENVVWQHFSGMAFYEPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAI VPAEFERLIVDTIVQEKAIAHPVDWRLMENARHKLVVAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQ RTLLGIVLREVQRKIGQASQATAPAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSV AITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRW LKRRQAEEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRA RNTRPHRLAWCVW
Sequences:
>Translated_493_residues MAHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARKVRAGRAVAQHDLFGPSVQVAGAGIAAAGRPRLP IRLMASLLDLKHAYKLSDEELVERWAENVVWQHFSGMAFYEPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAI VPAEFERLIVDTIVQEKAIAHPVDWRLMENARHKLVVAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQ RTLLGIVLREVQRKIGQASQATAPAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSV AITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRW LKRRQAEEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRA RNTRPHRLAWCVW >Mature_492_residues AHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARKVRAGRAVAQHDLFGPSVQVAGAGIAAAGRPRLPI RLMASLLDLKHAYKLSDEELVERWAENVVWQHFSGMAFYEPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAIV PAEFERLIVDTIVQEKAIAHPVDWRLMENARHKLVVAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQR TLLGIVLREVQRKIGQASQATAPAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVA ITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRWL KRRQAEEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRAR NTRPHRLAWCVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008490 [H]
Pfam domain/function: PF05598 DUF772 [H]
EC number: NA
Molecular weight: Translated: 54960; Mature: 54829
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARKVRAGRAVAQHDLF CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GPSVQVAGAGIAAAGRPRLPIRLMASLLDLKHAYKLSDEELVERWAENVVWQHFSGMAFY CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE EPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAIVPAEFERLIVDTIVQEKAIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC HPVDWRLMENARHKLVVAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQ CCCHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTLLGIVLREVQRKIGQASQATAPAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC ECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTA CCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC GAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRWLKRRQAEEPAIGHLKHDNGM CCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRA CCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNTRPHRLAWCVW CCCCCCEEEEEEC >Mature Secondary Structure AHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARKVRAGRAVAQHDLF CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GPSVQVAGAGIAAAGRPRLPIRLMASLLDLKHAYKLSDEELVERWAENVVWQHFSGMAFY CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE EPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAIVPAEFERLIVDTIVQEKAIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC HPVDWRLMENARHKLVVAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQ CCCHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTLLGIVLREVQRKIGQASQATAPAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC ECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTA CCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC GAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRWLKRRQAEEPAIGHLKHDNGM CCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRA CCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNTRPHRLAWCVW CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8429568 [H]