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The map label for this gene is yicJ [H]

Identifier: 84621962

GI number: 84621962

Start: 326214

End: 327596

Strand: Direct

Name: yicJ [H]

Synonym: XOO_0305

Alternate gene names: 84621962

Gene position: 326214-327596 (Clockwise)

Preceding gene: 84621960

Following gene: 84621963

Centisome position: 6.6

GC content: 62.98

Gene sequence:

>1383_bases
ATGACGTCATCGCCCGCAACGTCTCCTGCATCGGCGCGCCTGCGCTGGCGCGAAAAGCTGGGCTATGGCGCCGGCGATCT
GGGTCTGAATCTGTACTGGGCCAACATCTCGGCGTTCTTGCTGATCTTCTATACCGACACCATGCACCTGCCGGCTGCGG
CGGTCGGCACCATGATCCTGTTGACCAAGATTGCCGATGCGATTGCCGATCCGGCGATGGGCGCGCTGGCCGACCGCACG
CGTAGCCGGCTCGGCACGTTCCGCCCGTATCTGCTGTGGGGCGCGTTGCCGATGGCGGCTACCGGTGTGCTTGCTTACAC
CACGCCGGATCTGGATCAACACGGGCGCATGTGGTGGGCCACCATCACCTTCCTGGTGATGATGCTGGCGTACACAGTGG
TGAGCATTCCGTATTCGGCGTTGTCGGGCGTGATCACCGCCGACAGCCAGCAGCGTACCGGTCTCATCAGCCTGCGTTTC
ATCGGCGCGTTTGCAGGCACCACCTTGGTCAATTACGTCACGATGGATTTGGTGCGCTGGTTCGGCGCAGGCAACGATGC
GCTCGGATGGCAGCGCACGATGATGCTGTATGGCGCAGTGGCGCTGCTGTTATTGGTCACTGTGGCGCTGACCACGCGCG
AGCGCGTGCAACCGCCGCCGCAACAACGCACACCGATTCGTCGCGACATCGCCGACCTGCTGCAGAACAAACCGTGGTGC
GTCCTGTTCGTGCTGTCGTTGATCATCATGATCACGATCACCATGCGCGGCGGTGCGGGCGTGTACTACCTCAAGTACTA
CGTACAACGCGCGGATTTGGTCGGCCTGTTTCTGGGCAGCTATTCGGTGGCCTTGGGCGTGGGTGCGGCAATCACGCCGC
TGCTGACGCGGCGCTGGGACAAGCGCCAGCTGATGTTCTGGCTGATGGTGCTGGTCGGCCTGCTGAGCTGTTCGATGTGG
TTCGTGCCGGCCGATGCGGTGTGGGCCGTGTTTGTCTTGAACATGCTGATCGGGCTGGCGCTGGGGCCGAAATCGCCATT
GGCGTTTTCGATGTATGCCGATAGCGCCGACTACACCGAATGGCGCACCGGCCGCCGTGCCACGGCGATGACGTTTGCGG
CTGCGACATTTTCGCAAAAGCTTGGCGGCGCGTTGGCCTCGGCCGGCATTGCCTGGGTGCTGGCTGCGATGGGCTATGTC
GCCAACACCGCGCAGTCCATCGGGTCGTTGACCGGCATCGTGCTGCTGCTGACAGTGATTCCTGGTGCGGTTGCGCTGCT
GGCGGCCTGGACCATGCGTTTTTATCCGCTGGACGACGGGCTGTTGAACCGCATCCAGCATGAACTGGCCGCGCGCAAGC
GCGACGAACAGGAGCACCTGTGA

Upstream 100 bases:

>100_bases
CAGCCGATGCGTGGTGTAGCGTCGGCGCTCCTCGCCAGGTGCGCGGGCACCCAGCGTAACGGCGTGTTCGGCCGAGTACA
ACGCATTTGAAGGTGTGTCG

Downstream 100 bases:

>100_bases
CCGTGTCTGCAACGCCTCTTGCTGGTTCCGACGATCTGTCCACCTTGCTGGCACCCAGTGCCGACGGTGCGCGCTACGCG
CTCTATAGCCCCACCGCCAT

Product: cation symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MTSSPATSPASARLRWREKLGYGAGDLGLNLYWANISAFLLIFYTDTMHLPAAAVGTMILLTKIADAIADPAMGALADRT
RSRLGTFRPYLLWGALPMAATGVLAYTTPDLDQHGRMWWATITFLVMMLAYTVVSIPYSALSGVITADSQQRTGLISLRF
IGAFAGTTLVNYVTMDLVRWFGAGNDALGWQRTMMLYGAVALLLLVTVALTTRERVQPPPQQRTPIRRDIADLLQNKPWC
VLFVLSLIIMITITMRGGAGVYYLKYYVQRADLVGLFLGSYSVALGVGAAITPLLTRRWDKRQLMFWLMVLVGLLSCSMW
FVPADAVWAVFVLNMLIGLALGPKSPLAFSMYADSADYTEWRTGRRATAMTFAAATFSQKLGGALASAGIAWVLAAMGYV
ANTAQSIGSLTGIVLLLTVIPGAVALLAAWTMRFYPLDDGLLNRIQHELAARKRDEQEHL

Sequences:

>Translated_460_residues
MTSSPATSPASARLRWREKLGYGAGDLGLNLYWANISAFLLIFYTDTMHLPAAAVGTMILLTKIADAIADPAMGALADRT
RSRLGTFRPYLLWGALPMAATGVLAYTTPDLDQHGRMWWATITFLVMMLAYTVVSIPYSALSGVITADSQQRTGLISLRF
IGAFAGTTLVNYVTMDLVRWFGAGNDALGWQRTMMLYGAVALLLLVTVALTTRERVQPPPQQRTPIRRDIADLLQNKPWC
VLFVLSLIIMITITMRGGAGVYYLKYYVQRADLVGLFLGSYSVALGVGAAITPLLTRRWDKRQLMFWLMVLVGLLSCSMW
FVPADAVWAVFVLNMLIGLALGPKSPLAFSMYADSADYTEWRTGRRATAMTFAAATFSQKLGGALASAGIAWVLAAMGYV
ANTAQSIGSLTGIVLLLTVIPGAVALLAAWTMRFYPLDDGLLNRIQHELAARKRDEQEHL
>Mature_459_residues
TSSPATSPASARLRWREKLGYGAGDLGLNLYWANISAFLLIFYTDTMHLPAAAVGTMILLTKIADAIADPAMGALADRTR
SRLGTFRPYLLWGALPMAATGVLAYTTPDLDQHGRMWWATITFLVMMLAYTVVSIPYSALSGVITADSQQRTGLISLRFI
GAFAGTTLVNYVTMDLVRWFGAGNDALGWQRTMMLYGAVALLLLVTVALTTRERVQPPPQQRTPIRRDIADLLQNKPWCV
LFVLSLIIMITITMRGGAGVYYLKYYVQRADLVGLFLGSYSVALGVGAAITPLLTRRWDKRQLMFWLMVLVGLLSCSMWF
VPADAVWAVFVLNMLIGLALGPKSPLAFSMYADSADYTEWRTGRRATAMTFAAATFSQKLGGALASAGIAWVLAAMGYVA
NTAQSIGSLTGIVLLLTVIPGAVALLAAWTMRFYPLDDGLLNRIQHELAARKRDEQEHL

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI87082306, Length=452, Percent_Identity=39.6017699115044, Blast_Score=305, Evalue=4e-84,
Organism=Escherichia coli, GI1786466, Length=447, Percent_Identity=33.5570469798658, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI145693206, Length=470, Percent_Identity=28.936170212766, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI48994989, Length=454, Percent_Identity=27.5330396475771, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI1790561, Length=452, Percent_Identity=27.4336283185841, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787902, Length=464, Percent_Identity=28.0172413793103, Blast_Score=154, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50316; Mature: 50185

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPATSPASARLRWREKLGYGAGDLGLNLYWANISAFLLIFYTDTMHLPAAAVGTMIL
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHH
LTKIADAIADPAMGALADRTRSRLGTFRPYLLWGALPMAATGVLAYTTPDLDQHGRMWWA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHCCEEEEECCCCCCCCCHHHH
TITFLVMMLAYTVVSIPYSALSGVITADSQQRTGLISLRFIGAFAGTTLVNYVTMDLVRW
HHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
FGAGNDALGWQRTMMLYGAVALLLLVTVALTTRERVQPPPQQRTPIRRDIADLLQNKPWC
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHH
VLFVLSLIIMITITMRGGAGVYYLKYYVQRADLVGLFLGSYSVALGVGAAITPLLTRRWD
HHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRQLMFWLMVLVGLLSCSMWFVPADAVWAVFVLNMLIGLALGPKSPLAFSMYADSADYTE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
WRTGRRATAMTFAAATFSQKLGGALASAGIAWVLAAMGYVANTAQSIGSLTGIVLLLTVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PGAVALLAAWTMRFYPLDDGLLNRIQHELAARKRDEQEHL
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
TSSPATSPASARLRWREKLGYGAGDLGLNLYWANISAFLLIFYTDTMHLPAAAVGTMIL
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHH
LTKIADAIADPAMGALADRTRSRLGTFRPYLLWGALPMAATGVLAYTTPDLDQHGRMWWA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHCCEEEEECCCCCCCCCHHHH
TITFLVMMLAYTVVSIPYSALSGVITADSQQRTGLISLRFIGAFAGTTLVNYVTMDLVRW
HHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
FGAGNDALGWQRTMMLYGAVALLLLVTVALTTRERVQPPPQQRTPIRRDIADLLQNKPWC
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHH
VLFVLSLIIMITITMRGGAGVYYLKYYVQRADLVGLFLGSYSVALGVGAAITPLLTRRWD
HHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRQLMFWLMVLVGLLSCSMWFVPADAVWAVFVLNMLIGLALGPKSPLAFSMYADSADYTE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
WRTGRRATAMTFAAATFSQKLGGALASAGIAWVLAAMGYVANTAQSIGSLTGIVLLLTVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PGAVALLAAWTMRFYPLDDGLLNRIQHELAARKRDEQEHL
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]