Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84621956

Identifier: 84621956

GI number: 84621956

Start: 320995

End: 321444

Strand: Direct

Name: 84621956

Synonym: XOO_0299

Alternate gene names: NA

Gene position: 320995-321444 (Clockwise)

Preceding gene: 84621955

Following gene: 84621957

Centisome position: 6.5

GC content: 66.44

Gene sequence:

>450_bases
ATGTCGATCGTGATCATGCGCGGGCCGGAGGCGGCGATGCCGCTGGTGCGTGGGCCGCAGCCGTTGCCGCGCGCTGTCAT
TCGCCAATTGGTGGCCTGCGCCGGGGACGCGGGCAAGACCGTGGCCTTGCGTGCCTGTGGTTCGGAACAGGAACTGCTGG
ATGCGCTGCGTGTGGCCGGTCAGGCGCGGATGGAGATTGCGCTGATCGATCCGGGCAGTTGCGTGGACAGTGCGCGGTTG
CATCGCGTGCTCAGAGACCTGCCTTACCCCTATGTCGAAACGCACGACGACAGCGTGGACCGCCCGGAACGCTGCCTGCC
GAACGGTCTGGGGCACTGCATCGCCACGGTGCGTGGCTACTGCGCGCAGAGCTATCTGCTGGGGCTGGAGATCGCGCTGG
AACATCTGGGCTGCACGGAGATTCAAGGCGATGTCCACGTCGGGACCTGA

Upstream 100 bases:

>100_bases
CACGATGCGCTGCGTGCGTATGCGATGTCGCTTGGCATTGCCGCGCGGTGTCTGCCGTCGATGCACGCGCCGTTGCGCGT
TGCTGCCTGAGGAGGACGCC

Downstream 100 bases:

>100_bases
GCGGCGCCAGCTGCATTACTTCGCCGATTACGAAGGCTATTGCGACGGCCGGCCGGTGCTGTGGGGACAGCTGGCGCATA
GCGTGGACGTGCCAGCCGAT

Product: 3-dehydroquinate dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSIVIMRGPEAAMPLVRGPQPLPRAVIRQLVACAGDAGKTVALRACGSEQELLDALRVAGQARMEIALIDPGSCVDSARL
HRVLRDLPYPYVETHDDSVDRPERCLPNGLGHCIATVRGYCAQSYLLGLEIALEHLGCTEIQGDVHVGT

Sequences:

>Translated_149_residues
MSIVIMRGPEAAMPLVRGPQPLPRAVIRQLVACAGDAGKTVALRACGSEQELLDALRVAGQARMEIALIDPGSCVDSARL
HRVLRDLPYPYVETHDDSVDRPERCLPNGLGHCIATVRGYCAQSYLLGLEIALEHLGCTEIQGDVHVGT
>Mature_148_residues
SIVIMRGPEAAMPLVRGPQPLPRAVIRQLVACAGDAGKTVALRACGSEQELLDALRVAGQARMEIALIDPGSCVDSARLH
RVLRDLPYPYVETHDDSVDRPERCLPNGLGHCIATVRGYCAQSYLLGLEIALEHLGCTEIQGDVHVGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16009; Mature: 15878

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVIMRGPEAAMPLVRGPQPLPRAVIRQLVACAGDAGKTVALRACGSEQELLDALRVAG
CEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC
QARMEIALIDPGSCVDSARLHRVLRDLPYPYVETHDDSVDRPERCLPNGLGHCIATVRGY
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
CAQSYLLGLEIALEHLGCTEIQGDVHVGT
HHHHHHHHHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure 
SIVIMRGPEAAMPLVRGPQPLPRAVIRQLVACAGDAGKTVALRACGSEQELLDALRVAG
EEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC
QARMEIALIDPGSCVDSARLHRVLRDLPYPYVETHDDSVDRPERCLPNGLGHCIATVRGY
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
CAQSYLLGLEIALEHLGCTEIQGDVHVGT
HHHHHHHHHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA