| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621860
Identifier: 84621860
GI number: 84621860
Start: 219664
End: 221352
Strand: Direct
Name: 84621860
Synonym: XOO_0203
Alternate gene names: NA
Gene position: 219664-221352 (Clockwise)
Preceding gene: 84621859
Following gene: 84621861
Centisome position: 4.45
GC content: 60.51
Gene sequence:
>1689_bases ATGAGCGCGTCACAACGGCCCGGAATCACGCCATACGCGCTGGTATGGCTCGGTACGCTGCTGGCCTGGGTGGCGCTGAT CCTTTTCATCTACTATCGCCAATGGCAGTCAACAGGCGTGGAGGATTCCGGCTTGGGCAACGATATTCGTAATGGTGTAT TGGCGATCACCGCTCTGGTGGGCCTGGCCTTTGGGGGGCATTGGCTGTGGAAGGTGCGCAGTGCGGTGGCTAAGGACCCA GCTGCCATGGCAAGCGCCCAGGTCACGGCAGCTGCGGCCGCGACCGCGACCCCGCACGGGCGCATGCTCGCTGGCGAGGG GGAACGCTATGTCTTGGAGGTGCGCGGGCTGGGGTTAGCGGTAGATCGCTATTACCAGGAGGACACATGGAGGTTGTTCA AGGAGAAGGACGACAATTACCTTTCAGTGCTGTCGAAAGATCCTAAAGACTACGACCCCAATACGCGAATCGGCGATGCG ACGATTGCAGCTAATGCTTCTTTCGGTTACGCGGCGAAGAAAGCGGTGGAGCGCTGGCCGCTGCCAGTGATCATCATTGG GCCGCCGAAGACGATTGATGATGGAAGTTCAATGGCTGACGCCATTGCCTACAAGCGCCAGGCCGCAAGCCTCGGGTTGA CTCTTTTTCTCTGGCAGGAGGATGACAACACAGCCAGTGCCCAGGCAACACTGGAAAAGCTTTTTCGTTTCTTCGATGAG CATCCCGATGTGCCGGAGGTCTTGCTGGTCACGCAGGATGGCGAAGGTCCGCGCTATCGCTGGAAGTCGCCAGGGATGCC CGACAAACGGCCTGAAGCGCCTCACGTTCCGCTACTACCCGACAGCATGACTGCGCTATTGGTGGCACGCAGCGATCGGG TGGACAGGTTGGTGCGCCCGTATGCCGTGGATGTAGACGATGGCATCAATAAGGACGATACGCAGTACGACATCATCAAG TTGTGGAATTTCTTCTGGGAGAAGGCCGACGTTTTCGACATGCAGTATGAGGCGGCTCTCAAGGCAAAGGGCGTCAAATG GCCTGACGGTACGAACGTGCCCAAAGCTGATTGGTGGATTGCGCAACTGCCCGAATTGTGGAAGCAGATCAACAACAAGG GGCCGGGTGAGTTCAAGCCCAGCCCGTATCTGCCGGTGCGTTGGGCGCGCTGGCAGCTGCAGCAGTTCGACGAATCTCCG TTGCTGGGCTATCTGCATCGCCCGGTGCATGTGCCCCTGACCGACGAACAGGGCAAGCCACTCAAGCGTGCCGGGCAGGT GGAGGCGCTGCGCAAGGGCTGGGCCCAGGCCGTGTCGGCCCTACCGGAAGATGCCAAGCCCACGCGCGTGTTCTACGACA CCAGCCTGGATCGCGAATGGGTCATTCCCCTGACGCAAGCGCTGCACGGCAACGCCGAGGGCATCGAACTGGACGACAAG CACGAGGGCTACGACATCGGTCGGCGGCTGGGCAATACCGGCGTCAGTTCCGCGCTAGTGCAGATCGCGCTGGGCATCGT CTCCGGTTACGACGATGGCCGCACCAGTGCCACCGTCAACCTGACCCCGGATGGCTATGCGGGCATCGTAATGGTCAGCC CGCCCGACGAAGCCAGCAAAGCGGCCGCAATCCAGCACGGGAAGCATCCGTTCTACGACCTCTTGCGCGACAAGAAGGCC ACACCATGA
Upstream 100 bases:
>100_bases ACTACTACAAAACCGGGAAATTTCCGGATGTCGTGTCTAAGGAGCCGCCAGACAAATACGTGATAAGCAGGACCCGAGCG CAACGTGCGGAGAGCACCGA
Downstream 100 bases:
>100_bases GCCGCGCATTCATCGTCGAAGGCGATGCCCACAGCCACGGCGGCCATGTGCCGGCCGGTTCCGAACACGCAGGCATTGAT GGCCAGGCAGGTGTGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASAQVTAAAAATATPHGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKEKDDNYLSVLSKDPKDYDPNTRIGDA TIAANASFGYAAKKAVERWPLPVIIIGPPKTIDDGSSMADAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDE HPDVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIK LWNFFWEKADVFDMQYEAALKAKGVKWPDGTNVPKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQLQQFDESP LLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDK HEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRDKKA TP
Sequences:
>Translated_562_residues MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASAQVTAAAAATATPHGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKEKDDNYLSVLSKDPKDYDPNTRIGDA TIAANASFGYAAKKAVERWPLPVIIIGPPKTIDDGSSMADAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDE HPDVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIK LWNFFWEKADVFDMQYEAALKAKGVKWPDGTNVPKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQLQQFDESP LLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDK HEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRDKKA TP >Mature_561_residues SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDPA AMASAQVTAAAAATATPHGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKEKDDNYLSVLSKDPKDYDPNTRIGDAT IAANASFGYAAKKAVERWPLPVIIIGPPKTIDDGSSMADAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEH PDVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKL WNFFWEKADVFDMQYEAALKAKGVKWPDGTNVPKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQLQQFDESPL LGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKH EGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRDKKAT P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62327; Mature: 62196
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASAQVTAAAAATATPHGRMLAGEGERYVLEVRGLGLA HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCEE VDRYYQEDTWRLFKEKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKKAVERWP HHHHHHHHHHHHHHHCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC LPVIIIGPPKTIDDGSSMADAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDE CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHC HPDVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRP CCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHHHHCC YAVDVDDGINKDDTQYDIIKLWNFFWEKADVFDMQYEAALKAKGVKWPDGTNVPKADWWI EEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AQLPELWKQINNKGPGEFKPSPYLPVRWARWQLQQFDESPLLGYLHRPVHVPLTDEQGKP HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCCC LKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDK HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCC HEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASK CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHH AAAIQHGKHPFYDLLRDKKATP HHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASAQVTAAAAATATPHGRMLAGEGERYVLEVRGLGLA HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCEE VDRYYQEDTWRLFKEKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKKAVERWP HHHHHHHHHHHHHHHCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC LPVIIIGPPKTIDDGSSMADAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDE CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHC HPDVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRP CCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHHHHCC YAVDVDDGINKDDTQYDIIKLWNFFWEKADVFDMQYEAALKAKGVKWPDGTNVPKADWWI EEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AQLPELWKQINNKGPGEFKPSPYLPVRWARWQLQQFDESPLLGYLHRPVHVPLTDEQGKP HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCCC LKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDK HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCC HEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASK CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHH AAAIQHGKHPFYDLLRDKKATP HHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA