| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621839
Identifier: 84621839
GI number: 84621839
Start: 192375
End: 193388
Strand: Direct
Name: 84621839
Synonym: XOO_0182
Alternate gene names: NA
Gene position: 192375-193388 (Clockwise)
Preceding gene: 84621837
Following gene: 84621840
Centisome position: 3.89
GC content: 64.4
Gene sequence:
>1014_bases GTGTCCTCCAAGGCCATCGTGCCCGCCGAGTTCGAACGGCTGATCGTGGACACCACCGTGCAGGAGAAGGCCATTGCTCA TCCGGTGGATTGGCGCCTGATGGAGAACGCGCGGCACAAGCTGGTGGCGGCGGCCAAGCGCGCGGGCATCGCGCTCAAGC AGACCTTCGCCAAAGAAACCAAGACGCTGCGGCGCAAAGCCGGCGGCTACGCCCATGCCAGGCAGTTCAAGCGCCTGCGC AAGGTCCTCAAACGCCAGCGCACGCTCCTGGGCATCGTACTGCGCGAGGTGCAGCGCAAGATCGGGCAAGCCAGCCAGGC CACGCCGCCGGCGCTGGAGAATCTGCACACGCTGATGCAGCGCGCCGAGCGCATCCATGCTCAGCAACCCAATGGCAAGA ACAAACTCTATGCCCTGCACGCGCCCGAAGTGGAGTGCATCGGCAAGGGCAAGGCGCGCAAGCCCTACGAGTTCGGGGTG AAGGTCAGCGTGGCCATCACGCACAAACAGGGCCTGATGGTCGGCGCGCGCAGCTTCACCGGCACCCCCTATGACGGCCA CACGTTGCACGAGCAACTGGAGCAGGCCCGGATCCTGAGCGAGGACACAGCAGGCGCACCTAAACAGGTGGTGGTGGACC TGGGCTTTCGCGGTGTGGATGCGGCCAATCCCGGCGTTGAGATCATCCACCGGGGCACGTTCAAACGCCTGACAGATGAG CGGCGCCGCTGGCTGAAGCGACGCCAGGCGGTGGAGCCGGCCATCGGACACTTGAAGCACGACAACGGCATGGATCGGTG CTGGTTGCAAGGAGCGAACGGCGATGCGCTGCACGCAGTGCTGTGCGCGGCGGGGGACAACATCCGCTGGTTGCTGCGGG CCATGGTGCGTCTGGGACTGAAGGGTCTTTTTGCGCCTATGGTTGCGAGACTCATCATGCTGGCCACAGTGCTCGCAATG TCATTGCGAGCGAGGAACACACGCCCACATCGGTTGGCTTGGTGTGTTTGGTGA
Upstream 100 bases:
>100_bases GAGCGACGGTCCTAGCATCGACCGGTCGGCTCTCACTGGCTGCGACTGTGCTGAAAGATCGTGCTAATCAGGACTGCTCA AGGCCACCATCGACACCGCG
Downstream 100 bases:
>100_bases ATTTTTCAGGGGCGACTGATTAGTCGCCCCTGAAAAACCCCCAGACCGCATCCATTGCAAGGCCTCACCTGCGGTTTTGG CGTGCTGGAACTGCCAGTTT
Product: ISXoo5 transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISXoo4 Transposase; ISXoo5 Transposase; ISPg7 Transposase; Transposase Protein; Transposase IS4 Family; tRNA Nucleotidyltransferase; Transposase Of Disrupted Insertion Sequence; Transposase IS5 Family; IS5 Family Transposase; ISRSO9-Transposase Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLR KVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGV KVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAM SLRARNTRPHRLAWCVW
Sequences:
>Translated_337_residues MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLR KVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGV KVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAM SLRARNTRPHRLAWCVW >Mature_336_residues SSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRK VLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVK VSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDER RRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMS LRARNTRPHRLAWCVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37784; Mature: 37653
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKET CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH KTLRRKAGGYAHARQFKRLRKVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH RAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFT HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC GTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE CCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH KGLFAPMVARLIMLATVLAMSLRARNTRPHRLAWCVW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure SSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKET CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH KTLRRKAGGYAHARQFKRLRKVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH RAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFT HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC GTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE CCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH KGLFAPMVARLIMLATVLAMSLRARNTRPHRLAWCVW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA