Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84621839

Identifier: 84621839

GI number: 84621839

Start: 192375

End: 193388

Strand: Direct

Name: 84621839

Synonym: XOO_0182

Alternate gene names: NA

Gene position: 192375-193388 (Clockwise)

Preceding gene: 84621837

Following gene: 84621840

Centisome position: 3.89

GC content: 64.4

Gene sequence:

>1014_bases
GTGTCCTCCAAGGCCATCGTGCCCGCCGAGTTCGAACGGCTGATCGTGGACACCACCGTGCAGGAGAAGGCCATTGCTCA
TCCGGTGGATTGGCGCCTGATGGAGAACGCGCGGCACAAGCTGGTGGCGGCGGCCAAGCGCGCGGGCATCGCGCTCAAGC
AGACCTTCGCCAAAGAAACCAAGACGCTGCGGCGCAAAGCCGGCGGCTACGCCCATGCCAGGCAGTTCAAGCGCCTGCGC
AAGGTCCTCAAACGCCAGCGCACGCTCCTGGGCATCGTACTGCGCGAGGTGCAGCGCAAGATCGGGCAAGCCAGCCAGGC
CACGCCGCCGGCGCTGGAGAATCTGCACACGCTGATGCAGCGCGCCGAGCGCATCCATGCTCAGCAACCCAATGGCAAGA
ACAAACTCTATGCCCTGCACGCGCCCGAAGTGGAGTGCATCGGCAAGGGCAAGGCGCGCAAGCCCTACGAGTTCGGGGTG
AAGGTCAGCGTGGCCATCACGCACAAACAGGGCCTGATGGTCGGCGCGCGCAGCTTCACCGGCACCCCCTATGACGGCCA
CACGTTGCACGAGCAACTGGAGCAGGCCCGGATCCTGAGCGAGGACACAGCAGGCGCACCTAAACAGGTGGTGGTGGACC
TGGGCTTTCGCGGTGTGGATGCGGCCAATCCCGGCGTTGAGATCATCCACCGGGGCACGTTCAAACGCCTGACAGATGAG
CGGCGCCGCTGGCTGAAGCGACGCCAGGCGGTGGAGCCGGCCATCGGACACTTGAAGCACGACAACGGCATGGATCGGTG
CTGGTTGCAAGGAGCGAACGGCGATGCGCTGCACGCAGTGCTGTGCGCGGCGGGGGACAACATCCGCTGGTTGCTGCGGG
CCATGGTGCGTCTGGGACTGAAGGGTCTTTTTGCGCCTATGGTTGCGAGACTCATCATGCTGGCCACAGTGCTCGCAATG
TCATTGCGAGCGAGGAACACACGCCCACATCGGTTGGCTTGGTGTGTTTGGTGA

Upstream 100 bases:

>100_bases
GAGCGACGGTCCTAGCATCGACCGGTCGGCTCTCACTGGCTGCGACTGTGCTGAAAGATCGTGCTAATCAGGACTGCTCA
AGGCCACCATCGACACCGCG

Downstream 100 bases:

>100_bases
ATTTTTCAGGGGCGACTGATTAGTCGCCCCTGAAAAACCCCCAGACCGCATCCATTGCAAGGCCTCACCTGCGGTTTTGG
CGTGCTGGAACTGCCAGTTT

Product: ISXoo5 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISXoo4 Transposase; ISXoo5 Transposase; ISPg7 Transposase; Transposase Protein; Transposase IS4 Family; tRNA Nucleotidyltransferase; Transposase Of Disrupted Insertion Sequence; Transposase IS5 Family; IS5 Family Transposase; ISRSO9-Transposase Protein

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLR
KVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGV
KVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE
RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAM
SLRARNTRPHRLAWCVW

Sequences:

>Translated_337_residues
MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLR
KVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGV
KVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE
RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAM
SLRARNTRPHRLAWCVW
>Mature_336_residues
SSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRK
VLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVK
VSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDER
RRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMS
LRARNTRPHRLAWCVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37784; Mature: 37653

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKET
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
KTLRRKAGGYAHARQFKRLRKVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFT
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC
GTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH
RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
KGLFAPMVARLIMLATVLAMSLRARNTRPHRLAWCVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
SSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKET
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
KTLRRKAGGYAHARQFKRLRKVLKRQRTLLGIVLREVQRKIGQASQATPPALENLHTLMQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFT
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC
GTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDE
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH
RRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
KGLFAPMVARLIMLATVLAMSLRARNTRPHRLAWCVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA