| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621813
Identifier: 84621813
GI number: 84621813
Start: 162382
End: 162762
Strand: Direct
Name: 84621813
Synonym: XOO_0156
Alternate gene names: NA
Gene position: 162382-162762 (Clockwise)
Preceding gene: 84621811
Following gene: 84621814
Centisome position: 3.29
GC content: 64.57
Gene sequence:
>381_bases ATGCGCGCTGTTCTGCCTGTTGCCCGCCTGACTTGCACCCTGGTTGTGCTGACTGCATTGACTGCCTGCAACAAACCGCA ACCCGATGAGCAGGAAGCGGTCACCGCCAAGGCCCAGCACGCGGCCGAACAAGCCGCTGCGCCCGCGCCGGATGCAGCGC CGGAAGCGCCACCGATCGGCAGCTGCGATGCCACCCAGGTGCAATCGCTGGTGGGCCAGCCGTTGACCGATGCGGTGGGA GAACAGGCACGCAACGATGCCGGCGCCAAGTCGGTGCGTGTGCTCAAACCCGGCCAGATGACCACCATGGAATTCAACGG CGAACGGCTCAATCTGGAAGTGGATGCCAAGAACCTGATCACCTCGGTGCGCTGCGGCTGA
Upstream 100 bases:
>100_bases CTAGGCCACGTCAACGCAACGGCAACGCCGTGTGCGCAAGCCATGCCCGTCGCGTGACTTTGTGCTTATGCTTTGGCATC CCCCTTTGCTGGAGTGATCG
Downstream 100 bases:
>100_bases TAGGGCGTTGGCGCCTGTCGCAAGACCGGCGCAACGCCTGCTGGCACAAGGGATTGCAGCGGCTCTTGTTGCAGCTGTAA CGGTGTATTGCGGCACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRAVLPVARLTCTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGSCDATQVQSLVGQPLTDAVG EQARNDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNLITSVRCG
Sequences:
>Translated_126_residues MRAVLPVARLTCTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGSCDATQVQSLVGQPLTDAVG EQARNDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNLITSVRCG >Mature_126_residues MRAVLPVARLTCTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGSCDATQVQSLVGQPLTDAVG EQARNDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNLITSVRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13088; Mature: 13088
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVLPVARLTCTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SCDATQVQSLVGQPLTDAVGEQARNDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNLI CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEEEECHHHHH TSVRCG HHHCCC >Mature Secondary Structure MRAVLPVARLTCTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SCDATQVQSLVGQPLTDAVGEQARNDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNLI CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEEEECHHHHH TSVRCG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA