| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621808
Identifier: 84621808
GI number: 84621808
Start: 157090
End: 157875
Strand: Direct
Name: 84621808
Synonym: XOO_0151
Alternate gene names: NA
Gene position: 157090-157875 (Clockwise)
Preceding gene: 84621807
Following gene: 84621811
Centisome position: 3.18
GC content: 61.07
Gene sequence:
>786_bases ATGTCGTCGTTTCTGGACACACGCATCACTCGTCGTCACCTGATGGCTGCCGCCGGCACCTCGCTGCTGACCAGCAGCAT CCCCGCACTGGCCAAGACGCCGCCACCGCCGGATGTTGGCTACAAGTTTTGGGGTTCGCGGCGGCCGATGCCGTTTGCCG GCAATACCTTCTTGGGTCATCTAGAGCAACAGGGCGATGGCTACGACAGCTTCGACCGCGTGCTGAACATCTACCGCGAA CTGCCCGAACAGCGCTTCGCCAACAAATTCGCGTTGCTGCCGCCGAGCAGCTACCACGTGACCTTGTTGGGCGGGGTCAA TGAGAGCGACCGTGCGCATGGGCCATGGCCGAGCGATCTGGAGCGCGACCATGCTTTGGCGGACATCAACGCCGACTATC TGTTGCGAGTGAAAGAACGCGCTACGCCGCCGCTGGGCGCCTGCCGCTTCCTGGTCAACCCGACGGCGGCCAAGACCGGC GCTAACAACAATCTGCTGATTCCGTTAAAACCGGCGGACACACAAACCGCGCAGCGCCTGGAAACTGCACGCCAGGCGCT GATGCAACTGACACGCTTGCAGCGCCCCGACTACATCAACTTCCAGTTTCATATTTCGCTGGCCTACCTGTGCGATACGC TCGATGCAGCAGAACAAACGGCGTATCGCACGGCGGTGGGCGGCTGGCTCACACGGCTGGCAGCAGCGGGGCCGATCACA GTGCCGCGTTTCCATTTTTGTACGTTCGACGACATGTATGCATTTCGCACGATGCATGAGGTCTGA
Upstream 100 bases:
>100_bases GAATACCACATCGGCCGGCACCAGGAATACGTGCAATCGGCCTGGAAAATGGCACCCACCGTGATGCTCGGCATCAACGT CAAACTCTGAGGGCTTTCCC
Downstream 100 bases:
>100_bases GCTCGAGTGGAGGCGGCGACGGGGCTGTGTGACCTAGACGCGCGCCCGTTTTAAGGGCCCGCTCTCCTCAGGGCGAGAAG GCACAGCACGCGCTTCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSSFLDTRITRRHLMAAAGTSLLTSSIPALAKTPPPPDVGYKFWGSRRPMPFAGNTFLGHLEQQGDGYDSFDRVLNIYRE LPEQRFANKFALLPPSSYHVTLLGGVNESDRAHGPWPSDLERDHALADINADYLLRVKERATPPLGACRFLVNPTAAKTG ANNNLLIPLKPADTQTAQRLETARQALMQLTRLQRPDYINFQFHISLAYLCDTLDAAEQTAYRTAVGGWLTRLAAAGPIT VPRFHFCTFDDMYAFRTMHEV
Sequences:
>Translated_261_residues MSSFLDTRITRRHLMAAAGTSLLTSSIPALAKTPPPPDVGYKFWGSRRPMPFAGNTFLGHLEQQGDGYDSFDRVLNIYRE LPEQRFANKFALLPPSSYHVTLLGGVNESDRAHGPWPSDLERDHALADINADYLLRVKERATPPLGACRFLVNPTAAKTG ANNNLLIPLKPADTQTAQRLETARQALMQLTRLQRPDYINFQFHISLAYLCDTLDAAEQTAYRTAVGGWLTRLAAAGPIT VPRFHFCTFDDMYAFRTMHEV >Mature_260_residues SSFLDTRITRRHLMAAAGTSLLTSSIPALAKTPPPPDVGYKFWGSRRPMPFAGNTFLGHLEQQGDGYDSFDRVLNIYREL PEQRFANKFALLPPSSYHVTLLGGVNESDRAHGPWPSDLERDHALADINADYLLRVKERATPPLGACRFLVNPTAAKTGA NNNLLIPLKPADTQTAQRLETARQALMQLTRLQRPDYINFQFHISLAYLCDTLDAAEQTAYRTAVGGWLTRLAAAGPITV PRFHFCTFDDMYAFRTMHEV
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29179; Mature: 29047
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFLDTRITRRHLMAAAGTSLLTSSIPALAKTPPPPDVGYKFWGSRRPMPFAGNTFLGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHH LEQQGDGYDSFDRVLNIYRELPEQRFANKFALLPPSSYHVTLLGGVNESDRAHGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCH ERDHALADINADYLLRVKERATPPLGACRFLVNPTAAKTGANNNLLIPLKPADTQTAQRL HHCCCEECCCHHHEEEEHHHCCCCHHHHHEEECCCHHCCCCCCCEEEEECCCCHHHHHHH ETARQALMQLTRLQRPDYINFQFHISLAYLCDTLDAAEQTAYRTAVGGWLTRLAAAGPIT HHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPRFHFCTFDDMYAFRTMHEV CCCEEECCHHHHHHHHHHHCC >Mature Secondary Structure SSFLDTRITRRHLMAAAGTSLLTSSIPALAKTPPPPDVGYKFWGSRRPMPFAGNTFLGH CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHH LEQQGDGYDSFDRVLNIYRELPEQRFANKFALLPPSSYHVTLLGGVNESDRAHGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCH ERDHALADINADYLLRVKERATPPLGACRFLVNPTAAKTGANNNLLIPLKPADTQTAQRL HHCCCEECCCHHHEEEEHHHCCCCHHHHHEEECCCHHCCCCCCCEEEEECCCCHHHHHHH ETARQALMQLTRLQRPDYINFQFHISLAYLCDTLDAAEQTAYRTAVGGWLTRLAAAGPIT HHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPRFHFCTFDDMYAFRTMHEV CCCEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA