| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is macA [H]
Identifier: 84621791
GI number: 84621791
Start: 136224
End: 137471
Strand: Direct
Name: macA [H]
Synonym: XOO_0134
Alternate gene names: 84621791
Gene position: 136224-137471 (Clockwise)
Preceding gene: 84621790
Following gene: 84621792
Centisome position: 2.76
GC content: 66.43
Gene sequence:
>1248_bases ATGAACAACTCTGCCGATCTGCTGAAGGAACTGCGCATCGACCGTAAGGCCCCGTCCCGCGAATCGCCCTCGGGGCGCGG ATGGGGGATCGCCATCGCCACGCTCGTCGTCGTTATCGTGCTGCTGCTCGGTTTAGCCGCGTGGTGGTGGTGGCTTGGTC GGGCGCGGCCGCTGCAGGTGCGCACCGTACCGGTGGTGGCGATCAGCGCCGGCAGCACGTCGTCGTCGGTCCTTGATGCC AGCGGCTACGTGGTGGCGCGACGCATAGCCACGGTGTCGGCGCAGGTCACCGGCAAGGTGCTGCAGGTGATGATCGAGGA AGGCATGCGCGTGGAGGCCGGTCAGGTGATGGCCACGCTCGATCCGATCGAGACCAATGCGCAGCGCGAGGTCGGTGCCG CGCAACTCGCGGCGGCGCGCAGTCAGGTGCAGAACGTCCAGGCGCAGCTGGTCGTGGCCGAGGCCGATGCGATGCGGCTG CAGTCGCTGGTCGGCGAGCAACTGGTATCGCGTTCGCAGTACGATCAGGCGATGTCGCAGCGCGATGCGCTGCGCGCGCA GCTGCAGGTGGCCCAGCGCAATGTCGCGGTCGCCACGCACGAGTTGTCGCTGTCAGACATCCACGTCGACTTCACCGTGG TGCGCGCGCCGTTCGCCGGCGTGGTCACTGCCAAGGCCGCGCAGCCGGGCGAGATCGTCTCGCCGCTGGCCACCGGCGGT TTCACCCGCACCGGCATGATTGTCGACATGGATTCGTTGGAAGTGGAAGTGGAGGTTGGCGAGGCCTACATCGGCCGCGT GCAGCCGAAGATGCCGGCCGAAGTGATCCTCGACGCCTATCCAGACTGGCGCATCCCGGCCAAGGTGATCGCGATCATCC CGGCTGCCGACCGCGGCAAGGCCACAGTCAAGGTGCGCGTGGCGCTTAAGGTCAAGGATGCACGCATCGTGCCGGACATG GGCGTGCGGGTGAGTTTTTTGGAAAAGGCCACGGCGCAGCAGCAGAACACGCCGAAGGGCGTGCGGGTACCGGTTGCGTC ACTGCTGCATCGTGACGGCACCAGCCGCGTCTTCGTCCTCGGCAACGACAACCACGTCGCCCTGCGCGAGGTGAAGACCG GCATCGACATGGGCAGCGACAAGCAGGTGGTATCAGGCGTATCTGCGGGCGATACAGTGGTCGTCGAGCCACCGCAGGCG TTGAAGGATGGAGATGCGGTGACGTTGTCCAGCGACGCACAGGAGTGA
Upstream 100 bases:
>100_bases CCCGACGATACGCATCATGATGCTGTAGAGTCGCGTCCCAGGATTCGCCTCCAACTTAATGACTTCCTAGAGCGTGACAC GATCACGTTAACAGGTCTCA
Downstream 100 bases:
>100_bases GCGCGCTGCTGCGCGCGCCGGTGTGGTCTTCGTTTGATGTTGCGTGGATTGGTTCGAGGTCGTGAGCGGCGTCGGCAGTC GACCGAGGAAGGCGCTGCAC
Product: acriflavin resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNNSADLLKELRIDRKAPSRESPSGRGWGIAIATLVVVIVLLLGLAAWWWWLGRARPLQVRTVPVVAISAGSTSSSVLDA SGYVVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGAAQLAAARSQVQNVQAQLVVAEADAMRL QSLVGEQLVSRSQYDQAMSQRDALRAQLQVAQRNVAVATHELSLSDIHVDFTVVRAPFAGVVTAKAAQPGEIVSPLATGG FTRTGMIVDMDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPAKVIAIIPAADRGKATVKVRVALKVKDARIVPDM GVRVSFLEKATAQQQNTPKGVRVPVASLLHRDGTSRVFVLGNDNHVALREVKTGIDMGSDKQVVSGVSAGDTVVVEPPQA LKDGDAVTLSSDAQE
Sequences:
>Translated_415_residues MNNSADLLKELRIDRKAPSRESPSGRGWGIAIATLVVVIVLLLGLAAWWWWLGRARPLQVRTVPVVAISAGSTSSSVLDA SGYVVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGAAQLAAARSQVQNVQAQLVVAEADAMRL QSLVGEQLVSRSQYDQAMSQRDALRAQLQVAQRNVAVATHELSLSDIHVDFTVVRAPFAGVVTAKAAQPGEIVSPLATGG FTRTGMIVDMDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPAKVIAIIPAADRGKATVKVRVALKVKDARIVPDM GVRVSFLEKATAQQQNTPKGVRVPVASLLHRDGTSRVFVLGNDNHVALREVKTGIDMGSDKQVVSGVSAGDTVVVEPPQA LKDGDAVTLSSDAQE >Mature_415_residues MNNSADLLKELRIDRKAPSRESPSGRGWGIAIATLVVVIVLLLGLAAWWWWLGRARPLQVRTVPVVAISAGSTSSSVLDA SGYVVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGAAQLAAARSQVQNVQAQLVVAEADAMRL QSLVGEQLVSRSQYDQAMSQRDALRAQLQVAQRNVAVATHELSLSDIHVDFTVVRAPFAGVVTAKAAQPGEIVSPLATGG FTRTGMIVDMDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPAKVIAIIPAADRGKATVKVRVALKVKDARIVPDM GVRVSFLEKATAQQQNTPKGVRVPVASLLHRDGTSRVFVLGNDNHVALREVKTGIDMGSDKQVVSGVSAGDTVVVEPPQA LKDGDAVTLSSDAQE
Specific function: Efflux transporter for macrolide antibiotics [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081796, Length=362, Percent_Identity=24.0331491712707, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1789929, Length=363, Percent_Identity=25.8953168044077, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082036, Length=391, Percent_Identity=24.2966751918159, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786668, Length=336, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789665, Length=350, Percent_Identity=24, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 44260; Mature: 44260
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSADLLKELRIDRKAPSRESPSGRGWGIAIATLVVVIVLLLGLAAWWWWLGRARPLQV CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE RTVPVVAISAGSTSSSVLDASGYVVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATL EEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEE DPIETNAQREVGAAQLAAARSQVQNVQAQLVVAEADAMRLQSLVGEQLVSRSQYDQAMSQ CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RDALRAQLQVAQRNVAVATHELSLSDIHVDFTVVRAPFAGVVTAKAAQPGEIVSPLATGG HHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCC FTRTGMIVDMDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPAKVIAIIPAADRGK CEECCEEEEECCEEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCEEEEEEEECCCCCC ATVKVRVALKVKDARIVPDMGVRVSFLEKATAQQQNTPKGVRVPVASLLHRDGTSRVFVL EEEEEEEEEEEECCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEE GNDNHVALREVKTGIDMGSDKQVVSGVSAGDTVVVEPPQALKDGDAVTLSSDAQE ECCCEEEEEEHHHCCCCCCCHHHHCCCCCCCEEEECCCHHHCCCCEEEECCCCCC >Mature Secondary Structure MNNSADLLKELRIDRKAPSRESPSGRGWGIAIATLVVVIVLLLGLAAWWWWLGRARPLQV CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE RTVPVVAISAGSTSSSVLDASGYVVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATL EEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEE DPIETNAQREVGAAQLAAARSQVQNVQAQLVVAEADAMRLQSLVGEQLVSRSQYDQAMSQ CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RDALRAQLQVAQRNVAVATHELSLSDIHVDFTVVRAPFAGVVTAKAAQPGEIVSPLATGG HHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCC FTRTGMIVDMDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPAKVIAIIPAADRGK CEECCEEEEECCEEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCEEEEEEEECCCCCC ATVKVRVALKVKDARIVPDMGVRVSFLEKATAQQQNTPKGVRVPVASLLHRDGTSRVFVL EEEEEEEEEEEECCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEE GNDNHVALREVKTGIDMGSDKQVVSGVSAGDTVVVEPPQALKDGDAVTLSSDAQE ECCCEEEEEEHHHCCCCCCCHHHHCCCCCCCEEEECCCHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]