| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621773
Identifier: 84621773
GI number: 84621773
Start: 122226
End: 123077
Strand: Direct
Name: 84621773
Synonym: XOO_0116
Alternate gene names: NA
Gene position: 122226-123077 (Clockwise)
Preceding gene: 84621767
Following gene: 84621774
Centisome position: 2.47
GC content: 62.79
Gene sequence:
>852_bases ATGAGCAACGGCAATGGTGTAACGGCAACCCTGTCCGACGCCGTCGATAGCGTAAAGAGCACCGCCAACGAGTTGACCGA GACCATCGCCAGTACCACCAGCGAGGCGGTCGCCAGCGTGCAGGAGGCTGCAGGCACGGCGGTGGAAGAGGTCAAGACGC GTGTGGTCAAAGCGCGCAAGGCTGTAGTCAAGGTCGAAAAGACTGTGGCCAAGAAGGCCGGTGACGCGGCTACCGCAGTC AAGCGCAGCGTGGCCAAGACCAAGCGTTCGCTGACGGCAACCAAGGACGCTGCCAAGGACAAGCTGGTCGCCACCAAAGA TGCTGCCAAACAGAAGCTGGTGTCGACCAAGGACGCGGCCAAGCACAAGCTGACCTCGACCACCGATGCCGCCAAGCAAA AGTTGAGCAGCACCAGCGCCGCGGCCAAGAAGAAGATCACCGACACCAAGGCCAACACCAAGCGCAAGCTGGAAATTGCC AAAGCCAACGCCAAGGCCGAAGCGGCCGCACTGAGCGCCAAGACCGCTGCCAAGAGCGCAGCGCGCAAGACCGCTGTTGC AACGGTGAACGCGCGCACGGCAGCGAAGAAGGCAGCGGCCAAGTCGGCAGCAGCGAAGAAGTCTGTTGCCAAGACGCCAG CCAAGCCCGTGGCCAAGAAGGCGCCGGCCGCCAAGCAGACCGCGACCAAACAGGCCGCAGTGAAGAAAGCTCCGCTCAAG AAGGCCGTGACCAAAACCGCATTGAAGAAAGCCGCCAAGGTCACCAAGACCCCGGCAACGCGTGCTGTGGCCAAGACCAC CGCTGCCCGCAAGGCAGTGGGCAAAAAGGCGGCAAAGCGCGTCGCGCGCTGA
Upstream 100 bases:
>100_bases CGGACCCGGCGTAGCGTCCGCTTCATCCGATGCCTGTTCAGCATGTTGCGTGCGGTCGCGCATCGCCCGGTTTCCCGCAC TGACGCCCTTAGGAGGGTCT
Downstream 100 bases:
>100_bases GGTTGTAACGCTACGGCGCAGGACGCCACGCGGACACGTGATGCACGTGATATCTGAAGCCCCTCTCCTGCGGGAGAGGG GTTGGGGTGAGGGTACGGGG
Product: histone H1-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSNGNGVTATLSDAVDSVKSTANELTETIASTTSEAVASVQEAAGTAVEEVKTRVVKARKAVVKVEKTVAKKAGDAATAV KRSVAKTKRSLTATKDAAKDKLVATKDAAKQKLVSTKDAAKHKLTSTTDAAKQKLSSTSAAAKKKITDTKANTKRKLEIA KANAKAEAAALSAKTAAKSAARKTAVATVNARTAAKKAAAKSAAAKKSVAKTPAKPVAKKAPAAKQTATKQAAVKKAPLK KAVTKTALKKAAKVTKTPATRAVAKTTAARKAVGKKAAKRVAR
Sequences:
>Translated_283_residues MSNGNGVTATLSDAVDSVKSTANELTETIASTTSEAVASVQEAAGTAVEEVKTRVVKARKAVVKVEKTVAKKAGDAATAV KRSVAKTKRSLTATKDAAKDKLVATKDAAKQKLVSTKDAAKHKLTSTTDAAKQKLSSTSAAAKKKITDTKANTKRKLEIA KANAKAEAAALSAKTAAKSAARKTAVATVNARTAAKKAAAKSAAAKKSVAKTPAKPVAKKAPAAKQTATKQAAVKKAPLK KAVTKTALKKAAKVTKTPATRAVAKTTAARKAVGKKAAKRVAR >Mature_282_residues SNGNGVTATLSDAVDSVKSTANELTETIASTTSEAVASVQEAAGTAVEEVKTRVVKARKAVVKVEKTVAKKAGDAATAVK RSVAKTKRSLTATKDAAKDKLVATKDAAKQKLVSTKDAAKHKLTSTTDAAKQKLSSTSAAAKKKITDTKANTKRKLEIAK ANAKAEAAALSAKTAAKSAARKTAVATVNARTAAKKAAAKSAAAKKSVAKTPAKPVAKKAPAAKQTATKQAAVKKAPLKK AVTKTALKKAAKVTKTPATRAVAKTTAARKAVGKKAAKRVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28775; Mature: 28643
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGNGVTATLSDAVDSVKSTANELTETIASTTSEAVASVQEAAGTAVEEVKTRVVKARK CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVKVEKTVAKKAGDAATAVKRSVAKTKRSLTATKDAAKDKLVATKDAAKQKLVSTKDAA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHKLTSTTDAAKQKLSSTSAAAKKKITDTKANTKRKLEIAKANAKAEAAALSAKTAAKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH ARKTAVATVNARTAAKKAAAKSAAAKKSVAKTPAKPVAKKAPAAKQTATKQAAVKKAPLK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH KAVTKTALKKAAKVTKTPATRAVAKTTAARKAVGKKAAKRVAR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNGNGVTATLSDAVDSVKSTANELTETIASTTSEAVASVQEAAGTAVEEVKTRVVKARK CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVKVEKTVAKKAGDAATAVKRSVAKTKRSLTATKDAAKDKLVATKDAAKQKLVSTKDAA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHKLTSTTDAAKQKLSSTSAAAKKKITDTKANTKRKLEIAKANAKAEAAALSAKTAAKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH ARKTAVATVNARTAAKKAAAKSAAAKKSVAKTPAKPVAKKAPAAKQTATKQAAVKKAPLK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH KAVTKTALKKAAKVTKTPATRAVAKTTAARKAVGKKAAKRVAR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA