| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621762
Identifier: 84621762
GI number: 84621762
Start: 108236
End: 109222
Strand: Direct
Name: 84621762
Synonym: XOO_0105
Alternate gene names: NA
Gene position: 108236-109222 (Clockwise)
Preceding gene: 84621759
Following gene: 84621763
Centisome position: 2.19
GC content: 62.82
Gene sequence:
>987_bases GTGCATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTGCCGTGAGTTTGTC GATCGCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAGGACACTGTGCGGC GCAAGAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGATCGACAGCGCGCTG TCGACAGGGATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAGACCAGCTCAGCGA ACGCGGCCTGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCTGCGCCCATGCCGC CAGCCAGCCCTAAGGGCAGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTCGGTACATGAAGTC GCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCAGTTCGCGGTTCGC GGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCGGGAGAGT CCGAGCCCCGCCACTACTGGTTCTCGACGCGACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCACGGCACAAGGCCGA TGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGTAACTGGCGTGGTTT TCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAACTCCGTCG CATTCAAGATGCCTGCAGTATCCAAAAGTGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACCATCCCAACTCGAT TGCCACGCTGGCCTTCGGACTGGCTAG
Upstream 100 bases:
>100_bases GCGGCACAGGTGCTGCCGCCCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATTTTCAAAGAA GGGGGTGCATTCGGAAGGGG
Downstream 100 bases:
>100_bases GCTTATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCGTACCAACGGATTCGTATTTAGTAACACAGTA GAACTAAGGAACCTCTGAAC
Product: ISXo8 transposase
Products: NA
Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; Transcriptional Regulator; LOW QUALITY PROTEIN Transposase; ISRSO17-Transposase; Transposase-Like Protein; Transposase Of; Transposase IS; Transposase IS4 Protein; IS Sequence; FOG Transposase; Isrso17-Transposase Protein; IS6 Family Transposase; Transposase Protein; LOW QUALITY PROTEIN IS4 Family Transposase; Transposase ISRS
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSAL STGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGSRPRTRPMRDSAHAPISVHEV AQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGR WRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLD CHAGLRTG
Sequences:
>Translated_328_residues MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSAL STGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGSRPRTRPMRDSAHAPISVHEV AQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGR WRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLD CHAGLRTG >Mature_328_residues MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSAL STGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGSRPRTRPMRDSAHAPISVHEV AQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGR WRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLD CHAGLRTG
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36767; Mature: 36767
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVP CCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCC DQVVFQTKTALAMDQIDSALSTGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCC KVWWGSHQPAPMPPASPKGSRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCC TLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGR HHHHHHHEEEEEHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCC WRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAV EEEHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC SKSVRPRGSGPNATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVP CCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCC DQVVFQTKTALAMDQIDSALSTGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCC KVWWGSHQPAPMPPASPKGSRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCC TLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGR HHHHHHHEEEEEHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCC WRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAV EEEHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC SKSVRPRGSGPNATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA