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The map label for this gene is 84621758

Identifier: 84621758

GI number: 84621758

Start: 104358

End: 104828

Strand: Direct

Name: 84621758

Synonym: XOO_0101

Alternate gene names: NA

Gene position: 104358-104828 (Clockwise)

Preceding gene: 84621757

Following gene: 84621759

Centisome position: 2.11

GC content: 55.63

Gene sequence:

>471_bases
ATGAGCAGCGCGCGATTCGAAACCATCGTTCGACAGATGTGCGAGTCACTGGACTTGCCAGATGTGGAGTCGGTGCTTAG
TCGGCGTGTGCTTTGGGTAGAGGGCTTTGAGGTCTATCTGCACCTGCCGACACCACAGCCAGGAGACGACGCACAGCAAG
AAGCACTGTATTTACGCATCGCTTACGGGTTACCACCTGCCGGGCGGACATTGACCGTTTTTAGGCTTCTGCTCGAAGCC
AATCTTTCAGTGTATGCGCAGGACCAGGCACAGCTTGGATTGAACGATAACGGCGTTATCGTGCTAATCGTACGGGTACC
GCTGGACGACGACGTGGATGGCGCGTGGATATGCGATCTGCTTGCCCACTACGCCGAGCATGGCCGCTACTGGAACAATA
ATATCTTCGTTGCGCACGACGAGATGTTCGAAGGAATCGCGACGGGCAACTATCTGTGGTTGCGCGCCTGA

Upstream 100 bases:

>100_bases
CATCGGCAAGGCGGGCGACAACGCTAAGCAGCTCGTTGGCCAGTAATGGGCTTAGACATGCGCAGGGCTTGTAGGGGGCC
CTGTTCATGTCTCACCAAGG

Downstream 100 bases:

>100_bases
TACAGGCCTGTTGGCATCTTGCCGCAGCATCAATCATGGCTGCAGCTGCACCGATCAGCCATGGCACAGCAACCGAGTCG
CAGTGCACTGCCTGCCTCGT

Product: HpaB protein

Products: NA

Alternate protein names: Type III Secretion Protein HpaB; TIR Chaperone Family Protein; Glutamine Synthetase; Tir Chaperone Family Protein

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSSARFETIVRQMCESLDLPDVESVLSRRVLWVEGFEVYLHLPTPQPGDDAQQEALYLRIAYGLPPAGRTLTVFRLLLEA
NLSVYAQDQAQLGLNDNGVIVLIVRVPLDDDVDGAWICDLLAHYAEHGRYWNNNIFVAHDEMFEGIATGNYLWLRA

Sequences:

>Translated_156_residues
MSSARFETIVRQMCESLDLPDVESVLSRRVLWVEGFEVYLHLPTPQPGDDAQQEALYLRIAYGLPPAGRTLTVFRLLLEA
NLSVYAQDQAQLGLNDNGVIVLIVRVPLDDDVDGAWICDLLAHYAEHGRYWNNNIFVAHDEMFEGIATGNYLWLRA
>Mature_155_residues
SSARFETIVRQMCESLDLPDVESVLSRRVLWVEGFEVYLHLPTPQPGDDAQQEALYLRIAYGLPPAGRTLTVFRLLLEAN
LSVYAQDQAQLGLNDNGVIVLIVRVPLDDDVDGAWICDLLAHYAEHGRYWNNNIFVAHDEMFEGIATGNYLWLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17662; Mature: 17531

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSARFETIVRQMCESLDLPDVESVLSRRVLWVEGFEVYLHLPTPQPGDDAQQEALYLRI
CCCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCCCHHHEEEEEE
AYGLPPAGRTLTVFRLLLEANLSVYAQDQAQLGLNDNGVIVLIVRVPLDDDVDGAWICDL
EECCCCCCCHHHHHHHHHHCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCHHHHHH
LAHYAEHGRYWNNNIFVAHDEMFEGIATGNYLWLRA
HHHHHHCCEEECCCEEEEEHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
SSARFETIVRQMCESLDLPDVESVLSRRVLWVEGFEVYLHLPTPQPGDDAQQEALYLRI
CCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCCCHHHEEEEEE
AYGLPPAGRTLTVFRLLLEANLSVYAQDQAQLGLNDNGVIVLIVRVPLDDDVDGAWICDL
EECCCCCCCHHHHHHHHHHCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCHHHHHH
LAHYAEHGRYWNNNIFVAHDEMFEGIATGNYLWLRA
HHHHHHCCEEECCCEEEEEHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA