| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490357
Identifier: 84490357
GI number: 84490357
Start: 1759592
End: 1759981
Strand: Direct
Name: 84490357
Synonym: Msp_1580
Alternate gene names: NA
Gene position: 1759592-1759981 (Clockwise)
Preceding gene: 84490356
Following gene: 84490358
Centisome position: 99.56
GC content: 23.85
Gene sequence:
>390_bases ATGAAGCGTATTGTTTTTGAAGATATAAGTACATTTATTGTGAAGTACATCTTCCATTTACGTTTTAAAGTTGCACTTTT AAGTAGAAAATCAAGAATTTTCAATAAAATACTAACAAAACTACTTTTTGAAGATGATAAAACATATTTTATTCCAAATA ACAATAATATTACCCACTTAGAAACTATTGAAGTTAATAAAACAATTGATAAAACCAAAAATATCGTATTTCCAAGTGAT ATTATTAAAGAAATTATTAGAAATGCTAATTATATTGTTATAATGAATAGTTGTTTATGTAGAACTTCTGCAAATTGTAA TGATTATCCACAGAATAGGTTGTATATTTCTTGGAAGAGCTACAAAAAAGATTTCCAGAAAGTATTGTAG
Upstream 100 bases:
>100_bases TTAACTGCTACAATGGAAGGAAAAGCAGTTACTGTGTATAAAGCTCAAATGACAGTGGATATTTAATTCCACCTTTTTTT TAATTTTTAGGATTGATACT
Downstream 100 bases:
>100_bases AGAAGTAACACCAGATGAGGCTATTAATCATATTGATAAATGTAATAATGCTGGATTAATTCATATTATGGGTAGAAATA AACTTGATGTTAGGTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKRIVFEDISTFIVKYIFHLRFKVALLSRKSRIFNKILTKLLFEDDKTYFIPNNNNITHLETIEVNKTIDKTKNIVFPSD IIKEIIRNANYIVIMNSCLCRTSANCNDYPQNRLYISWKSYKKDFQKVL
Sequences:
>Translated_129_residues MKRIVFEDISTFIVKYIFHLRFKVALLSRKSRIFNKILTKLLFEDDKTYFIPNNNNITHLETIEVNKTIDKTKNIVFPSD IIKEIIRNANYIVIMNSCLCRTSANCNDYPQNRLYISWKSYKKDFQKVL >Mature_129_residues MKRIVFEDISTFIVKYIFHLRFKVALLSRKSRIFNKILTKLLFEDDKTYFIPNNNNITHLETIEVNKTIDKTKNIVFPSD IIKEIIRNANYIVIMNSCLCRTSANCNDYPQNRLYISWKSYKKDFQKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15433; Mature: 15433
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVFEDISTFIVKYIFHLRFKVALLSRKSRIFNKILTKLLFEDDKTYFIPNNNNITHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE ETIEVNKTIDKTKNIVFPSDIIKEIIRNANYIVIMNSCLCRTSANCNDYPQNRLYISWKS EEEECCCHHHHHCCEECCHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCEEEEEHHH YKKDFQKVL HHHHHHHCC >Mature Secondary Structure MKRIVFEDISTFIVKYIFHLRFKVALLSRKSRIFNKILTKLLFEDDKTYFIPNNNNITHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE ETIEVNKTIDKTKNIVFPSDIIKEIIRNANYIVIMNSCLCRTSANCNDYPQNRLYISWKS EEEECCCHHHHHCCEECCHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCEEEEEHHH YKKDFQKVL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA