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The map label for this gene is 84490340

Identifier: 84490340

GI number: 84490340

Start: 1738407

End: 1738805

Strand: Direct

Name: 84490340

Synonym: Msp_1562

Alternate gene names: NA

Gene position: 1738407-1738805 (Clockwise)

Preceding gene: 84490339

Following gene: 84490341

Centisome position: 98.36

GC content: 31.83

Gene sequence:

>399_bases
ATGAGTGACATTATAAGAGGATGGCGTCATAACGATCAAAGATATAATTTAATAGGAACTAAATGTAAAACATGTGGAGA
AACATTTTTTCCAAAACAAGTAGTTTGTCCTAACTGTAGAAGCCACGGAAGCATTGAAGATCTCCAATTTAAAGGAACAG
GTAAAATTTATACATACTCAATAATCCATGCTGCTACTGATGAATTCAAAAATAATTCACCATATGCTGTAGGTATAATA
GAGCTTGATGAAGGAGCTAAAATAACAGCACAAATTGTTGATTGCGACTTCGATGAAATAGAAATTGGTGACGAAGTAGA
AGTAGTATTTAGAAAAATAAGAGAAGATGGAAAAGAAGGAGTAATAACATATGGATACAAATTCAAACTCAAAGAATGA

Upstream 100 bases:

>100_bases
AGATGTTAATTTAATATAATAACTAAGAAATAGTTTATTAATAAAAAGAAAATTTCAAATTATTAATAAAAAAAACATAA
CTCAATACGGAGGATTATAT

Downstream 100 bases:

>100_bases
TACTGGAATATTATTAATAGGTCATGGAAGTAGACTACCATACAACAAAGAAGTTATAAGTGCAATTGCAGAAAAATATG
CACAAACAAAACCTGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSDIIRGWRHNDQRYNLIGTKCKTCGETFFPKQVVCPNCRSHGSIEDLQFKGTGKIYTYSIIHAATDEFKNNSPYAVGII
ELDEGAKITAQIVDCDFDEIEIGDEVEVVFRKIREDGKEGVITYGYKFKLKE

Sequences:

>Translated_132_residues
MSDIIRGWRHNDQRYNLIGTKCKTCGETFFPKQVVCPNCRSHGSIEDLQFKGTGKIYTYSIIHAATDEFKNNSPYAVGII
ELDEGAKITAQIVDCDFDEIEIGDEVEVVFRKIREDGKEGVITYGYKFKLKE
>Mature_131_residues
SDIIRGWRHNDQRYNLIGTKCKTCGETFFPKQVVCPNCRSHGSIEDLQFKGTGKIYTYSIIHAATDEFKNNSPYAVGIIE
LDEGAKITAQIVDCDFDEIEIGDEVEVVFRKIREDGKEGVITYGYKFKLKE

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15049; Mature: 14918

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIIRGWRHNDQRYNLIGTKCKTCGETFFPKQVVCPNCRSHGSIEDLQFKGTGKIYTYS
CCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEE
IIHAATDEFKNNSPYAVGIIELDEGAKITAQIVDCDFDEIEIGDEVEVVFRKIREDGKEG
EEEECHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCEECCCHHHHHHHHHHHCCCCC
VITYGYKFKLKE
EEEEEEEEEECC
>Mature Secondary Structure 
SDIIRGWRHNDQRYNLIGTKCKTCGETFFPKQVVCPNCRSHGSIEDLQFKGTGKIYTYS
CCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEE
IIHAATDEFKNNSPYAVGIIELDEGAKITAQIVDCDFDEIEIGDEVEVVFRKIREDGKEG
EEEECHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCEECCCHHHHHHHHHHHCCCCC
VITYGYKFKLKE
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]