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The map label for this gene is 84490200

Identifier: 84490200

GI number: 84490200

Start: 1593878

End: 1594288

Strand: Direct

Name: 84490200

Synonym: Msp_1418

Alternate gene names: NA

Gene position: 1593878-1594288 (Clockwise)

Preceding gene: 84490198

Following gene: 84490204

Centisome position: 90.18

GC content: 29.68

Gene sequence:

>411_bases
ATGAGTAAAACTGGATCAAAAGAAGAACGGGACCTTGTTAATAAATTATGGAATGCTAATTTTGCAGCTATGCGTGCACC
TGCAAGTGGTGGTGCAACAAAAAGACCACTTCCTGATGTACTTGCAGGTAATGGAAAATTATATCTTGCTATAGAAGTTA
AATCTACACGTCAAGAATATATTTATATTGATAATGAGAAGATTACTAATTTATTAAAATTTTCAAAAATCTTTGGTGCA
AAAGCATATGTTGGTGCAAAATTCATTAGAAAACCTTGGAGATTTATAAAAATTGAGGATTTACATATAACACGCAAAAA
CAATTACAGAGTAAATATTGACTTAGCATTTAGTAAGGGATTGGATTTTAATGAAATTATTGGAGAAAGTAAGCAGACAA
AATTAATTTAA

Upstream 100 bases:

>100_bases
TAGAATCAATTAATATAACATTAATATATTAACTTATGATTATATAAATTTTATTAAAAACAGGATATTAATAAAAAAAA
TATATCTGGGACTTAAAATT

Downstream 100 bases:

>100_bases
ATTTATTTAGGTGGATAATATGGATTCAAATAACATGACAATAGAATGTCCTATAGATAAAGCAACGAATATTTTCAGTA
AAAAATAGACTATACAAATA

Product: putative holliday junction resolvase

Products: NA

Alternate protein names: Resolvase Holliday Junction-Type; Archaeal Type Holliday Junction Resolvase; Type Holliday Junction Resolvase; Archaeal Holliday Junction Resolvase; Archaeal Holliday Junction Resolvase Hjc; Resolvase; Holliday-Junction Resolvase

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSKTGSKEERDLVNKLWNANFAAMRAPASGGATKRPLPDVLAGNGKLYLAIEVKSTRQEYIYIDNEKITNLLKFSKIFGA
KAYVGAKFIRKPWRFIKIEDLHITRKNNYRVNIDLAFSKGLDFNEIIGESKQTKLI

Sequences:

>Translated_136_residues
MSKTGSKEERDLVNKLWNANFAAMRAPASGGATKRPLPDVLAGNGKLYLAIEVKSTRQEYIYIDNEKITNLLKFSKIFGA
KAYVGAKFIRKPWRFIKIEDLHITRKNNYRVNIDLAFSKGLDFNEIIGESKQTKLI
>Mature_135_residues
SKTGSKEERDLVNKLWNANFAAMRAPASGGATKRPLPDVLAGNGKLYLAIEVKSTRQEYIYIDNEKITNLLKFSKIFGAK
AYVGAKFIRKPWRFIKIEDLHITRKNNYRVNIDLAFSKGLDFNEIIGESKQTKLI

Specific function: Unknown

COG id: COG1591

COG function: function code L; Holliday junction resolvase - archaeal type

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15481; Mature: 15350

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTGSKEERDLVNKLWNANFAAMRAPASGGATKRPLPDVLAGNGKLYLAIEVKSTRQEY
CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCEEE
IYIDNEKITNLLKFSKIFGAKAYVGAKFIRKPWRFIKIEDLHITRKNNYRVNIDLAFSKG
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEEEEEECCCEEEEEEEEECCC
LDFNEIIGESKQTKLI
CCHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKTGSKEERDLVNKLWNANFAAMRAPASGGATKRPLPDVLAGNGKLYLAIEVKSTRQEY
CCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCEEE
IYIDNEKITNLLKFSKIFGAKAYVGAKFIRKPWRFIKIEDLHITRKNNYRVNIDLAFSKG
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEEEEEECCCEEEEEEEEECCC
LDFNEIIGESKQTKLI
CCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA