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The map label for this gene is 84490179

Identifier: 84490179

GI number: 84490179

Start: 1564825

End: 1565667

Strand: Direct

Name: 84490179

Synonym: Msp_1396

Alternate gene names: NA

Gene position: 1564825-1565667 (Clockwise)

Preceding gene: 84490178

Following gene: 84490180

Centisome position: 88.54

GC content: 29.42

Gene sequence:

>843_bases
ATGGATATTATAGGAATACTCACCTCGGGAGTAAATGATATAATAAGTATGTTTCAGAGTGGAGGAATAATCGTATATTT
ACTTACTGTAATAGGTCTTTATGGATTATTTCTTGCACTTGAGAAAATATGGTATTTACGAAAAGCATCAGAAGTTGACT
TATCAGAATTAATGATTGTTGTTAATGAATCCATGGCACATGGTGGTTCACTAGAAGCTTTAAGAGCAATTGGTAACTAT
AAAACACCATTATCCAGAATAATTTCTGAAGCTCTTAAAATTGGATACAGAAGTAAATCTGAAGTTGAAGATAACATGGA
ACAGGTTTTTATTGTTGAAATGAGTAAAATGATGAAAGGTCTCTCAACAATACAAACAATTATTGAAATGGCACCACTAC
TAGGATTAATAGGTACAGTTCTTGGAATGTGGTATACATTCAAAGAATTAGGAGTAAGTAATGATATTACTCTTCTAGCT
AATGGTATATACATTGCAATTATAACTACAATATTTGGATTAGCAGTAGCAATTATATTACTACCCTTCTATACATACAT
AAAAAACAAGATAGAAGTACAGTTAGATAATATTGAAATTGCTAAGAAAATGAGTAACTGGAGACATGCTGAAATGAAAA
TCTGGATTGAAACAGATAAAGAAGAAGTAATAGAAGCATTACAAGAATCTCCAGGTATTATTAAAGTAAAAGAAATTGAT
GATGAACAAGCAAATCTAAAAGTAGCTATTAAACCAAATATGCTAGAAAAAGGGATAAAAACAATAATTAGAGAATGTTC
TGATACATCCAATAGGATTGTTGAAAGTAAATTAAAACAATAA

Upstream 100 bases:

>100_bases
AATTTATATAATATAAAATTAAGATATATACATTATATATAGAAAAAATTTTTAATCTGAGTACTAAAATAAAAAAATTC
CACTTAGGAGTAAAAATAAA

Downstream 100 bases:

>100_bases
ACAAAAGTTTTATAGAAGGAATATCTAATGGCTATTGACACTAAACAATTTAAAGATAAAATTAAACAACAAAACCCTAA
CATAAATCTTGTACCATTGT

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDIIGILTSGVNDIISMFQSGGIIVYLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIVVNESMAHGGSLEALRAIGNY
KTPLSRIISEALKIGYRSKSEVEDNMEQVFIVEMSKMMKGLSTIQTIIEMAPLLGLIGTVLGMWYTFKELGVSNDITLLA
NGIYIAIITTIFGLAVAIILLPFYTYIKNKIEVQLDNIEIAKKMSNWRHAEMKIWIETDKEEVIEALQESPGIIKVKEID
DEQANLKVAIKPNMLEKGIKTIIRECSDTSNRIVESKLKQ

Sequences:

>Translated_280_residues
MDIIGILTSGVNDIISMFQSGGIIVYLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIVVNESMAHGGSLEALRAIGNY
KTPLSRIISEALKIGYRSKSEVEDNMEQVFIVEMSKMMKGLSTIQTIIEMAPLLGLIGTVLGMWYTFKELGVSNDITLLA
NGIYIAIITTIFGLAVAIILLPFYTYIKNKIEVQLDNIEIAKKMSNWRHAEMKIWIETDKEEVIEALQESPGIIKVKEID
DEQANLKVAIKPNMLEKGIKTIIRECSDTSNRIVESKLKQ
>Mature_280_residues
MDIIGILTSGVNDIISMFQSGGIIVYLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIVVNESMAHGGSLEALRAIGNY
KTPLSRIISEALKIGYRSKSEVEDNMEQVFIVEMSKMMKGLSTIQTIIEMAPLLGLIGTVLGMWYTFKELGVSNDITLLA
NGIYIAIITTIFGLAVAIILLPFYTYIKNKIEVQLDNIEIAKKMSNWRHAEMKIWIETDKEEVIEALQESPGIIKVKEID
DEQANLKVAIKPNMLEKGIKTIIRECSDTSNRIVESKLKQ

Specific function: Unknown

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 31366; Mature: 31366

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIGILTSGVNDIISMFQSGGIIVYLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIV
CCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VNESMAHGGSLEALRAIGNYKTPLSRIISEALKIGYRSKSEVEDNMEQVFIVEMSKMMKG
HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSTIQTIIEMAPLLGLIGTVLGMWYTFKELGVSNDITLLANGIYIAIITTIFGLAVAIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
LPFYTYIKNKIEVQLDNIEIAKKMSNWRHAEMKIWIETDKEEVIEALQESPGIIKVKEID
HHHHHHHCCHHEEEECHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEECC
DEQANLKVAIKPNMLEKGIKTIIRECSDTSNRIVESKLKQ
CCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MDIIGILTSGVNDIISMFQSGGIIVYLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIV
CCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VNESMAHGGSLEALRAIGNYKTPLSRIISEALKIGYRSKSEVEDNMEQVFIVEMSKMMKG
HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSTIQTIIEMAPLLGLIGTVLGMWYTFKELGVSNDITLLANGIYIAIITTIFGLAVAIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
LPFYTYIKNKIEVQLDNIEIAKKMSNWRHAEMKIWIETDKEEVIEALQESPGIIKVKEID
HHHHHHHCCHHEEEECHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEECC
DEQANLKVAIKPNMLEKGIKTIIRECSDTSNRIVESKLKQ
CCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]