| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490146
Identifier: 84490146
GI number: 84490146
Start: 1527944
End: 1528618
Strand: Direct
Name: 84490146
Synonym: Msp_1358
Alternate gene names: NA
Gene position: 1527944-1528618 (Clockwise)
Preceding gene: 84490145
Following gene: 84490147
Centisome position: 86.45
GC content: 28.44
Gene sequence:
>675_bases ATGTCAAAAGGAAAAATAACTCCAAAAAACATATTACATGGAAATAAAAAAAAACAAGAAAAAATAACTCTTGAAAACCT ACTTGAAGTAGCAAGTAGTGATAATGTATCTGATGCCATGAAAAATTTATATGGTAAAGACGGCCTTATTAATGGTATTA AACCAATAGATCCATCATATAAAGTTGTTGGAAAAATTAAAACAGCAACTACCAATTCATATGATTGGGGTACTGGTATA AAAGGAATTTATAACACCAATATTGATGAAATCTTATTTATTAAATGTTCAGATGATGAATATGCAGTGTGGGGTGAAAT GGCATCTAAAGCTGCACAAAAACAAGGACTAAAGGCTACTGTTATTTATGGAGTATCTAGAGACACAGAAGATATTATTA AATTAAATTATAAAGTATTTTCAAAAGATATAAAATCACATGCTGGACTTCCATCAAATAATGGCTTGTTAAATGAACGT ATTGTTATTGATGATAACATTATTTGTAATGGTGATGTTCTTGTTGGAGATATGGATGGTGTTGTTATAATACCACAGGA AAAAGTAGAAGAAGTACTTCATGAAGTTGAAAACATAAAGAAATTTGAAACTGAAAGTTTAAAGGAAATGATAGATAAGG AGATTCCTTTAGATGAAGTTTTAGGTATTAAATAA
Upstream 100 bases:
>100_bases ATTAGTTGAAGAAGTAACAACACCACAAGACTAAATACTCATAACTACCTTTTTTTATATTATTTTTTTTATAATAGATA TTTTTAGAGATGAAATTTAA
Downstream 100 bases:
>100_bases TTATTTTTAACATACTTAACTTCTAATTTTTTTTTAATTAATTTTAAAATAATCCCCTATTTATAAAAATAAAGAATATT ATATTTTATTTATCAAAAAA
Product: demethylmenaquinone methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSKGKITPKNILHGNKKKQEKITLENLLEVASSDNVSDAMKNLYGKDGLINGIKPIDPSYKVVGKIKTATTNSYDWGTGI KGIYNTNIDEILFIKCSDDEYAVWGEMASKAAQKQGLKATVIYGVSRDTEDIIKLNYKVFSKDIKSHAGLPSNNGLLNER IVIDDNIICNGDVLVGDMDGVVIIPQEKVEEVLHEVENIKKFETESLKEMIDKEIPLDEVLGIK
Sequences:
>Translated_224_residues MSKGKITPKNILHGNKKKQEKITLENLLEVASSDNVSDAMKNLYGKDGLINGIKPIDPSYKVVGKIKTATTNSYDWGTGI KGIYNTNIDEILFIKCSDDEYAVWGEMASKAAQKQGLKATVIYGVSRDTEDIIKLNYKVFSKDIKSHAGLPSNNGLLNER IVIDDNIICNGDVLVGDMDGVVIIPQEKVEEVLHEVENIKKFETESLKEMIDKEIPLDEVLGIK >Mature_223_residues SKGKITPKNILHGNKKKQEKITLENLLEVASSDNVSDAMKNLYGKDGLINGIKPIDPSYKVVGKIKTATTNSYDWGTGIK GIYNTNIDEILFIKCSDDEYAVWGEMASKAAQKQGLKATVIYGVSRDTEDIIKLNYKVFSKDIKSHAGLPSNNGLLNERI VIDDNIICNGDVLVGDMDGVVIIPQEKVEEVLHEVENIKKFETESLKEMIDKEIPLDEVLGIK
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 24827; Mature: 24696
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGKITPKNILHGNKKKQEKITLENLLEVASSDNVSDAMKNLYGKDGLINGIKPIDPSY CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCE KVVGKIKTATTNSYDWGTGIKGIYNTNIDEILFIKCSDDEYAVWGEMASKAAQKQGLKAT EEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCEEE VIYGVSRDTEDIIKLNYKVFSKDIKSHAGLPSNNGLLNERIVIDDNIICNGDVLVGDMDG EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCEEEECCCC VVIIPQEKVEEVLHEVENIKKFETESLKEMIDKEIPLDEVLGIK EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure SKGKITPKNILHGNKKKQEKITLENLLEVASSDNVSDAMKNLYGKDGLINGIKPIDPSY CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCE KVVGKIKTATTNSYDWGTGIKGIYNTNIDEILFIKCSDDEYAVWGEMASKAAQKQGLKAT EEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCEEE VIYGVSRDTEDIIKLNYKVFSKDIKSHAGLPSNNGLLNERIVIDDNIICNGDVLVGDMDG EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCEEEECCCC VVIIPQEKVEEVLHEVENIKKFETESLKEMIDKEIPLDEVLGIK EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]