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The map label for this gene is bioY [H]

Identifier: 84490142

GI number: 84490142

Start: 1524075

End: 1524692

Strand: Direct

Name: bioY [H]

Synonym: Msp_1354

Alternate gene names: 84490142

Gene position: 1524075-1524692 (Clockwise)

Preceding gene: 84490139

Following gene: 84490145

Centisome position: 86.23

GC content: 30.58

Gene sequence:

>618_bases
ATGTTTATAGACATTAACAAAGATAAAATACATGAGATACAAATGTCATGGTATTCATGGAGAAATAATGCTAGTACAAC
TACAATGGTATTATTATCATTTTTAGTAGCATGTTTCACTGGCCTTATGGCTCAAGTATCAATTGCAATTCCATGGAGTC
CTGTTTTAATTACTTTCCAAACATTTGCTGTATTACTTGCAGGTGTATTCTTAGGTAGTAAATGGGGTGGATTCAGTATG
ATATTATATACTGTTCTTGGTATTTTAGGAATGCCATGGTTTACAAGTATGCATAGTGGACTTGAATGGATCTTCTCAGC
TAGTGGAGGATACATAATTGGATTTATTTTAGCATCCATATTTATTGGACATGTATTTGATAATTATACTACTGCTAGAA
AACCTATCCAAACAGTTATATTAATGTTAATTGCTAATTTTGTAGTAATATACATACCAGGTTTACTTGGATTATATAAT
TTCATGATAAATAATGGAAAACCTGTAACAATCACAGGATTATTAATTGCTGGTGTTGTACCATTTATAGTAGGAGACTT
ACTTAAAATTGCAATGGCATCTGGAATAACCACATCTATTTTACCAAAAGAAGATTAA

Upstream 100 bases:

>100_bases
AGATATATCTGATTATTATTAAACAATATGATATTTTAATAATTATAATAAGAAATAATTCTTTTTAAAAAAAATATGAA
TTAAAAGGAGTAACAATTTT

Downstream 100 bases:

>100_bases
TTCTTCTTTATTTTTTTTAAATAAAAATAGAATCTATTTTTTTAAAATTATATTTAGAAAAAGTAATTTGAAAGAAAAAA
TTATTAATAGAAAACTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFIDINKDKIHEIQMSWYSWRNNASTTTMVLLSFLVACFTGLMAQVSIAIPWSPVLITFQTFAVLLAGVFLGSKWGGFSM
ILYTVLGILGMPWFTSMHSGLEWIFSASGGYIIGFILASIFIGHVFDNYTTARKPIQTVILMLIANFVVIYIPGLLGLYN
FMINNGKPVTITGLLIAGVVPFIVGDLLKIAMASGITTSILPKED

Sequences:

>Translated_205_residues
MFIDINKDKIHEIQMSWYSWRNNASTTTMVLLSFLVACFTGLMAQVSIAIPWSPVLITFQTFAVLLAGVFLGSKWGGFSM
ILYTVLGILGMPWFTSMHSGLEWIFSASGGYIIGFILASIFIGHVFDNYTTARKPIQTVILMLIANFVVIYIPGLLGLYN
FMINNGKPVTITGLLIAGVVPFIVGDLLKIAMASGITTSILPKED
>Mature_205_residues
MFIDINKDKIHEIQMSWYSWRNNASTTTMVLLSFLVACFTGLMAQVSIAIPWSPVLITFQTFAVLLAGVFLGSKWGGFSM
ILYTVLGILGMPWFTSMHSGLEWIFSASGGYIIGFILASIFIGHVFDNYTTARKPIQTVILMLIANFVVIYIPGLLGLYN
FMINNGKPVTITGLLIAGVVPFIVGDLLKIAMASGITTSILPKED

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 22499; Mature: 22499

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIDINKDKIHEIQMSWYSWRNNASTTTMVLLSFLVACFTGLMAQVSIAIPWSPVLITFQ
CEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TFAVLLAGVFLGSKWGGFSMILYTVLGILGMPWFTSMHSGLEWIFSASGGYIIGFILASI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FIGHVFDNYTTARKPIQTVILMLIANFVVIYIPGLLGLYNFMINNGKPVTITGLLIAGVV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
PFIVGDLLKIAMASGITTSILPKED
HHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MFIDINKDKIHEIQMSWYSWRNNASTTTMVLLSFLVACFTGLMAQVSIAIPWSPVLITFQ
CEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TFAVLLAGVFLGSKWGGFSMILYTVLGILGMPWFTSMHSGLEWIFSASGGYIIGFILASI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FIGHVFDNYTTARKPIQTVILMLIANFVVIYIPGLLGLYNFMINNGKPVTITGLLIAGVV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
PFIVGDLLKIAMASGITTSILPKED
HHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]