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The map label for this gene is gap

Identifier: 84490134

GI number: 84490134

Start: 1513707

End: 1514720

Strand: Direct

Name: gap

Synonym: Msp_1346

Alternate gene names: 84490134

Gene position: 1513707-1514720 (Clockwise)

Preceding gene: 84490133

Following gene: 84490135

Centisome position: 85.65

GC content: 33.73

Gene sequence:

>1014_bases
ATGAAAAGTATTGGAATAAATGGATATGGAACAATAGGTAAAAGAGTAGCAGACGCTGTATCTGCTCAAGATGACATGAA
AATTGTTGGAGTTACAAAAAGAACTCCAGATTATGAAGCTAAAGCTGCTGTTGAAAAAGGATATGACCTATATATAAGTG
TTCCAGAAAGAGAAAGCCAATTTGAAGAAGCAGGAATTGAAGTAGCAGGAACTGCTGATGAATTATTTGAAAAATTAGAT
TTAGTTGTAGATTGTACACCCGGAGGCATAGGTGCACAAAATAAAACAGATATCTATGAAAAAATTGGATTAAAAGCAAT
ATTTGAAGGTGGAGAAGATCATGATGCTATAGGCTCCTCATTCAATGCTGAAGCAAATTATGCTGATAATATAGGTGAAG
ATTATGTACGTGTTGTATCATGTAACACAACAGGTTTATGTCGTACATTAAAACCTATCTATGATATTTCAGGTATAAAA
AAAGTTAGAGCAGTAATGGTACGTCGTGGAGCTGATCCATCAGATGTTAAAAAAGGACCTATAAACAGTATTGTACCTAC
AACAGAAGTACCATCACACCATGGACCTGATGTACAAACTATTATTGATGATATTAATGTAATGACAATGGCATTACTCG
TTCCAACAACACTTATGCACACTCATAACATAATGGTTGAATTAGAAGATAAAATCACAACTGATGATGTACTTGATGCA
TTTGAAAATGCACACCGTGTATTACCTGTTCAAAAAAGTCTTAAATTAGGATCTACTGCAGAAATAATGGAATATGCTAA
AGATCTTGGACGTTCCAGAGGAGACATGTATGAAATACCAGTATGGAAAGAATCAGTCAATATAGAAAATGGAGAATTAT
TCTATATGCAAGCAGTCCACCAAGAATCCGATGTAGTACCAGAAAATGTCGATGCTATAAGAGCAATGCTTGAATTAGAA
GAAGATGGTGAAAAATCCATATTAAAAACAAATAAAGCAATGGGTATATTATAA

Upstream 100 bases:

>100_bases
TAATACTATAAACTAAAATATCAAAAAAAACATGATATTTAACTAAATTTCTAGAAAAATATTTAAATTGATAAGATTTT
TTTTATAGGGCGTATTAAAA

Downstream 100 bases:

>100_bases
ATTATACTTATTTCTCCCCACCATACTTTTTTTTAACTGATTCTATTAAATATTATTAAGATGCTTTTAAAAAATAATGT
ACATGAAAATTTGTTTATAT

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQFEEAGIEVAGTADELFEKLD
LVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSSFNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIK
KVRAVMVRRGADPSDVKKGPINSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDA
FENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVHQESDVVPENVDAIRAMLELE
EDGEKSILKTNKAMGIL

Sequences:

>Translated_337_residues
MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQFEEAGIEVAGTADELFEKLD
LVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSSFNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIK
KVRAVMVRRGADPSDVKKGPINSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDA
FENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVHQESDVVPENVDAIRAMLELE
EDGEKSILKTNKAMGIL
>Mature_337_residues
MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQFEEAGIEVAGTADELFEKLD
LVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSSFNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIK
KVRAVMVRRGADPSDVKKGPINSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDA
FENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVHQESDVVPENVDAIRAMLELE
EDGEKSILKTNKAMGIL

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): G3P_METST (Q2NEN0)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_448366.1
- ProteinModelPortal:   Q2NEN0
- SMR:   Q2NEN0
- STRING:   Q2NEN0
- GeneID:   3855085
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_1346
- NMPDR:   fig|339860.6.peg.1292
- eggNOG:   arNOG04694
- HOGENOM:   HBG392099
- OMA:   HHGPDVQ
- ProtClustDB:   PRK04207
- BioCyc:   MSTA339860:MSP_1346-MONOMER
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_00559
- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PIRSF:   PIRSF000149
- SMART:   SM00846
- TIGRFAMs:   TIGR01546

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N

EC number: =1.2.1.59

Molecular weight: Translated: 36910; Mature: 36910

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00071 GAPDH

Important sites: ACT_SITE 141-141 BINDING 111-111 BINDING 169-169 BINDING 301-301

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQ
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCHHHH
FEEAGIEVAGTADELFEKLDLVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSS
HHHCCCEEECCHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHCCHHEECCCCCCHHCCCC
FNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIKKVRAVMVRRGADPSDVKKGP
CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
INSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
FENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVH
HHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEECC
QESDVVPENVDAIRAMLELEEDGEKSILKTNKAMGIL
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHHCCC
>Mature Secondary Structure
MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQ
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCHHHH
FEEAGIEVAGTADELFEKLDLVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSS
HHHCCCEEECCHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHCCHHEECCCCCCHHCCCC
FNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIKKVRAVMVRRGADPSDVKKGP
CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
INSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
FENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVH
HHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEECC
QESDVVPENVDAIRAMLELEEDGEKSILKTNKAMGIL
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA