Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84490129

Identifier: 84490129

GI number: 84490129

Start: 1509264

End: 1509644

Strand: Direct

Name: 84490129

Synonym: Msp_1341

Alternate gene names: NA

Gene position: 1509264-1509644 (Clockwise)

Preceding gene: 84490128

Following gene: 84490130

Centisome position: 85.39

GC content: 24.15

Gene sequence:

>381_bases
ATGAAAATAAATATAAAAAATATTTTTTCAGGAAAAACTATACCTTTAACTATTTTAATGATAATTGCTACTAGTACATT
ACTTGACCAAGATTCCACATTAATACTACCTCTTTTATTATTTGTAGGAATAGTATGTGGAATAATAAAACATGATTCTA
TGACCTATACTTTAATAACAGCATTTGTTGCTTTTATGTTAGGTTTCATATTATCGTTTATAATCTCATTAATTAGTGTT
TATTATATTGAAGGTGGATTATATGCCATTGCACTTATACAATCATCCCTTGTTTATCTAATTTTATATATATTTGTAGG
TTGTCTTGGGAGTTCACTAGGTTTTCATATAATAAATGAGTTATATGAATTAAAACAATAA

Upstream 100 bases:

>100_bases
ATATTGTAGATAATTATTTCCCAAATAAAATAAGTGCTATTGAAGGTAAACCAATAGAATAGGTAAATAATTATTTACTT
ATATTCTTTTTTTTGGAGGG

Downstream 100 bases:

>100_bases
TATAATTTAGAGGTAATTAATATGGATTTAAATGAATTATTTGAAAGTAAAACAATACCCATTGGTGTATCAATAATTGT
AATAGCATATCTTATTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKINIKNIFSGKTIPLTILMIIATSTLLDQDSTLILPLLLFVGIVCGIIKHDSMTYTLITAFVAFMLGFILSFIISLISV
YYIEGGLYAIALIQSSLVYLILYIFVGCLGSSLGFHIINELYELKQ

Sequences:

>Translated_126_residues
MKINIKNIFSGKTIPLTILMIIATSTLLDQDSTLILPLLLFVGIVCGIIKHDSMTYTLITAFVAFMLGFILSFIISLISV
YYIEGGLYAIALIQSSLVYLILYIFVGCLGSSLGFHIINELYELKQ
>Mature_126_residues
MKINIKNIFSGKTIPLTILMIIATSTLLDQDSTLILPLLLFVGIVCGIIKHDSMTYTLITAFVAFMLGFILSFIISLISV
YYIEGGLYAIALIQSSLVYLILYIFVGCLGSSLGFHIINELYELKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13960; Mature: 13960

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINIKNIFSGKTIPLTILMIIATSTLLDQDSTLILPLLLFVGIVCGIIKHDSMTYTLIT
CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AFVAFMLGFILSFIISLISVYYIEGGLYAIALIQSSLVYLILYIFVGCLGSSLGFHIINE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LYELKQ
HHHHCC
>Mature Secondary Structure
MKINIKNIFSGKTIPLTILMIIATSTLLDQDSTLILPLLLFVGIVCGIIKHDSMTYTLIT
CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AFVAFMLGFILSFIISLISVYYIEGGLYAIALIQSSLVYLILYIFVGCLGSSLGFHIINE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LYELKQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA