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The map label for this gene is 84490059

Identifier: 84490059

GI number: 84490059

Start: 1436088

End: 1436924

Strand: Direct

Name: 84490059

Synonym: Msp_1271

Alternate gene names: NA

Gene position: 1436088-1436924 (Clockwise)

Preceding gene: 84490058

Following gene: 84490060

Centisome position: 81.25

GC content: 28.67

Gene sequence:

>837_bases
ATGAATATGAAAGTAGAAGTTATTCCCATTAAAACAGATTATATCAAACCAAATGAAGGATACTATACTCTTATAACCAA
TATCATAAAATATTGTCAAGATGATGATTATATTGTAATTAGTGAAACTCCCATATCAACAGCTGAAGGCAATTTAGTTG
ATGAATCAAAATACATACCAAGTATCGCTGCATCTATTTTAACAGAGTTATGGAGTAAATATTTATGGGGATATGTTTTA
TGTCCATTTTTAGGTTATAAAAAAAGAACAATAACCAATCTTAGAAACATGCCCCATGAGGCAAGATACCATAAACAGTT
CATATTAGAAAAATATGGATTAAAATATGCACTACAACCTACATCTGAAGCTGGTGTTGATTTAAGTAATGTTCCTGAAC
AATATGTATCTCTTCTTCCAGAAAATCCACAAAAGAGTGCTGATTATATTAAAGAAATTATACACAAAAAAACAGGGAAA
AATGTAAATATAATAATCTGTGATACTGATGCAACATATGATTTCTATGGAAAGAAATTTACCACATTACCCCAATCCAT
AGAGACAATTCATAATAATACTGGTATTTTTGGATATATTCTTGGAAATTTCTCTAAAAAAATAGGTCCAACACCTCTTG
CATCTACTGTTAAGTGTGATGTTGAAATGTTAATAAAACTATGTGCAATTGCTGAAAAATCACAAGTTGAAAATACCAAT
ACTTTTTTTGAAACTGTATATAATATGAAAACTACATTTGATACTGATTATAATAAGGTTACCCCTGCGCTTCTAAATAC
AATTACACATATACCTGCAGTGATTATAAGATTTTAA

Upstream 100 bases:

>100_bases
TCTCCCTTGAAACATTACGTCGTGGATTAAGAGGAGACACTCTTGGAAAATTATAAATTTCCTCTTTTATTTTTTTAATA
AAAAAACCATTTTTAGAGAT

Downstream 100 bases:

>100_bases
ATAACTATTTATAATAAGTAAAGACATAATAATATATTAGTTATTTATGATAGATCCATTTAATAAAATTTTAAATGTAT
ATCAACTCTATAGTCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNMKVEVIPIKTDYIKPNEGYYTLITNIIKYCQDDDYIVISETPISTAEGNLVDESKYIPSIAASILTELWSKYLWGYVL
CPFLGYKKRTITNLRNMPHEARYHKQFILEKYGLKYALQPTSEAGVDLSNVPEQYVSLLPENPQKSADYIKEIIHKKTGK
NVNIIICDTDATYDFYGKKFTTLPQSIETIHNNTGIFGYILGNFSKKIGPTPLASTVKCDVEMLIKLCAIAEKSQVENTN
TFFETVYNMKTTFDTDYNKVTPALLNTITHIPAVIIRF

Sequences:

>Translated_278_residues
MNMKVEVIPIKTDYIKPNEGYYTLITNIIKYCQDDDYIVISETPISTAEGNLVDESKYIPSIAASILTELWSKYLWGYVL
CPFLGYKKRTITNLRNMPHEARYHKQFILEKYGLKYALQPTSEAGVDLSNVPEQYVSLLPENPQKSADYIKEIIHKKTGK
NVNIIICDTDATYDFYGKKFTTLPQSIETIHNNTGIFGYILGNFSKKIGPTPLASTVKCDVEMLIKLCAIAEKSQVENTN
TFFETVYNMKTTFDTDYNKVTPALLNTITHIPAVIIRF
>Mature_278_residues
MNMKVEVIPIKTDYIKPNEGYYTLITNIIKYCQDDDYIVISETPISTAEGNLVDESKYIPSIAASILTELWSKYLWGYVL
CPFLGYKKRTITNLRNMPHEARYHKQFILEKYGLKYALQPTSEAGVDLSNVPEQYVSLLPENPQKSADYIKEIIHKKTGK
NVNIIICDTDATYDFYGKKFTTLPQSIETIHNNTGIFGYILGNFSKKIGPTPLASTVKCDVEMLIKLCAIAEKSQVENTN
TFFETVYNMKTTFDTDYNKVTPALLNTITHIPAVIIRF

Specific function: Unknown

COG id: COG4071

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002847
- InterPro:   IPR012030 [H]

Pfam domain/function: PF01996 F420_ligase [H]

EC number: NA

Molecular weight: Translated: 31677; Mature: 31677

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKVEVIPIKTDYIKPNEGYYTLITNIIKYCQDDDYIVISETPISTAEGNLVDESKYIP
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHH
SIAASILTELWSKYLWGYVLCPFLGYKKRTITNLRNMPHEARYHKQFILEKYGLKYALQP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECC
TSEAGVDLSNVPEQYVSLLPENPQKSADYIKEIIHKKTGKNVNIIICDTDATYDFYGKKF
CCHHCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCH
TTLPQSIETIHNNTGIFGYILGNFSKKIGPTPLASTVKCDVEMLIKLCAIAEKSQVENTN
HHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
TFFETVYNMKTTFDTDYNKVTPALLNTITHIPAVIIRF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNMKVEVIPIKTDYIKPNEGYYTLITNIIKYCQDDDYIVISETPISTAEGNLVDESKYIP
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHH
SIAASILTELWSKYLWGYVLCPFLGYKKRTITNLRNMPHEARYHKQFILEKYGLKYALQP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECC
TSEAGVDLSNVPEQYVSLLPENPQKSADYIKEIIHKKTGKNVNIIICDTDATYDFYGKKF
CCHHCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCH
TTLPQSIETIHNNTGIFGYILGNFSKKIGPTPLASTVKCDVEMLIKLCAIAEKSQVENTN
HHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
TFFETVYNMKTTFDTDYNKVTPALLNTITHIPAVIIRF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]