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The map label for this gene is 84489935

Identifier: 84489935

GI number: 84489935

Start: 1315881

End: 1316939

Strand: Direct

Name: 84489935

Synonym: Msp_1143

Alternate gene names: NA

Gene position: 1315881-1316939 (Clockwise)

Preceding gene: 84489923

Following gene: 84489937

Centisome position: 74.45

GC content: 25.78

Gene sequence:

>1059_bases
ATGAAAATGGACAGTTCTACAATTACACGTAAAAATATATTAGATGATGTTACAAGTCTACTTACATCGTTTGGTTTTAA
AACTTCAAATATCTATGACAGAAACTGTTTTGATTTACTAGCTAGAAAAAAAGACATACTCATAATACTAAAGATACTTG
TTAATATAGATAGCTTAACACCAACACAAGCAGAAGAATTATCTAAAATCTCTGGAACTTTTCTTGCAAGTCCAATAATA
ATTGGATATAAATCTAAACATAACTACTTAGAAGAAGATATTGTATACGAACGTCATGAAATTCCAGTAATATCACCACA
AACATTATGTAATATTATTGTTAATGATATTCATCCAGAAATATTTGCAAAAAGAGGTGGATATTATGTTAAAATCAATG
GTAATTTACTTAAAAATTTACGTGAAAAAAATAATTTATCACTGAAAGAACTTGCAGATATAAGTCATGTTTCTAGAGAA
ACAATTTATAAATATGAGAAAGGAAATTCACAGACATATCCTGAAACTGCAATGATGCTAGAACAAGTATTAAACAGTCC
AATTACAGAATCAATTAATTTACTAGAAACAAACAATACAAAAACCACAACACTTGATAAGAAAATTCAAGAACCAATAG
AATTAATTAAATTAGGTTATGATATAAAATCATCAAATAAAGCTCCTTTTGATGCAATATCTGAAAGACAAGAAGAAACA
GAAGAAGTAAGACAATTAAAAGAAAAACTTGAAAGTAAATTAGATGAAATTGAAAAAATCAGGGCAGAAATCAATAAAAA
AACTAAACATCATAATCTATTAATTACTAATATGGAACGTAATCGTAGTGATAATACATTGAATAAAATAGCAAATTGTA
CTGAGGATATTTCTCTAATTACAGGACATGATGCATTATTTGTTCTTGAACATAAAAAAGATAAAGAATTTATCAAAAAA
ATACCTGCCATATATACATGGGAACTTAAAAATATGGACAATATGGAAGAATTATTAAAACTAATAAAAGAAAGAAAAGA
AGAAGCTAATGATTCATAA

Upstream 100 bases:

>100_bases
AACTTTATTAATTTCTGTGAATTCAAAGTATTACTTCTCCCATAAAATATTGTTATTTACTATTATAATATTTTATAAGA
AAAAATATATATTATATATT

Downstream 100 bases:

>100_bases
TTTGAATTTATTAATAATTCCAAGTGTTTCTTCTGCTTCACTTTCCTTTGCTAAACCAACACATACACAATCTACATAAT
CAATATTTTTTATAAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKMDSSTITRKNILDDVTSLLTSFGFKTSNIYDRNCFDLLARKKDILIILKILVNIDSLTPTQAEELSKISGTFLASPII
IGYKSKHNYLEEDIVYERHEIPVISPQTLCNIIVNDIHPEIFAKRGGYYVKINGNLLKNLREKNNLSLKELADISHVSRE
TIYKYEKGNSQTYPETAMMLEQVLNSPITESINLLETNNTKTTTLDKKIQEPIELIKLGYDIKSSNKAPFDAISERQEET
EEVRQLKEKLESKLDEIEKIRAEINKKTKHHNLLITNMERNRSDNTLNKIANCTEDISLITGHDALFVLEHKKDKEFIKK
IPAIYTWELKNMDNMEELLKLIKERKEEANDS

Sequences:

>Translated_352_residues
MKMDSSTITRKNILDDVTSLLTSFGFKTSNIYDRNCFDLLARKKDILIILKILVNIDSLTPTQAEELSKISGTFLASPII
IGYKSKHNYLEEDIVYERHEIPVISPQTLCNIIVNDIHPEIFAKRGGYYVKINGNLLKNLREKNNLSLKELADISHVSRE
TIYKYEKGNSQTYPETAMMLEQVLNSPITESINLLETNNTKTTTLDKKIQEPIELIKLGYDIKSSNKAPFDAISERQEET
EEVRQLKEKLESKLDEIEKIRAEINKKTKHHNLLITNMERNRSDNTLNKIANCTEDISLITGHDALFVLEHKKDKEFIKK
IPAIYTWELKNMDNMEELLKLIKERKEEANDS
>Mature_352_residues
MKMDSSTITRKNILDDVTSLLTSFGFKTSNIYDRNCFDLLARKKDILIILKILVNIDSLTPTQAEELSKISGTFLASPII
IGYKSKHNYLEEDIVYERHEIPVISPQTLCNIIVNDIHPEIFAKRGGYYVKINGNLLKNLREKNNLSLKELADISHVSRE
TIYKYEKGNSQTYPETAMMLEQVLNSPITESINLLETNNTKTTTLDKKIQEPIELIKLGYDIKSSNKAPFDAISERQEET
EEVRQLKEKLESKLDEIEKIRAEINKKTKHHNLLITNMERNRSDNTLNKIANCTEDISLITGHDALFVLEHKKDKEFIKK
IPAIYTWELKNMDNMEELLKLIKERKEEANDS

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 40659; Mature: 40659

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMDSSTITRKNILDDVTSLLTSFGFKTSNIYDRNCFDLLARKKDILIILKILVNIDSLT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCC
PTQAEELSKISGTFLASPIIIGYKSKHNYLEEDIVYERHEIPVISPQTLCNIIVNDIHPE
CCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHH
IFAKRGGYYVKINGNLLKNLREKNNLSLKELADISHVSRETIYKYEKGNSQTYPETAMML
HHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EQVLNSPITESINLLETNNTKTTTLDKKIQEPIELIKLGYDIKSSNKAPFDAISERQEET
HHHHCCCHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
EEVRQLKEKLESKLDEIEKIRAEINKKTKHHNLLITNMERNRSDNTLNKIANCTEDISLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHEE
TGHDALFVLEHKKDKEFIKKIPAIYTWELKNMDNMEELLKLIKERKEEANDS
ECCCEEEEEECCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKMDSSTITRKNILDDVTSLLTSFGFKTSNIYDRNCFDLLARKKDILIILKILVNIDSLT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCC
PTQAEELSKISGTFLASPIIIGYKSKHNYLEEDIVYERHEIPVISPQTLCNIIVNDIHPE
CCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHH
IFAKRGGYYVKINGNLLKNLREKNNLSLKELADISHVSRETIYKYEKGNSQTYPETAMML
HHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EQVLNSPITESINLLETNNTKTTTLDKKIQEPIELIKLGYDIKSSNKAPFDAISERQEET
HHHHCCCHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
EEVRQLKEKLESKLDEIEKIRAEINKKTKHHNLLITNMERNRSDNTLNKIANCTEDISLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHEE
TGHDALFVLEHKKDKEFIKKIPAIYTWELKNMDNMEELLKLIKERKEEANDS
ECCCEEEEEECCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA