Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489856

Identifier: 84489856

GI number: 84489856

Start: 1203539

End: 1203682

Strand: Direct

Name: 84489856

Synonym: Msp_1061

Alternate gene names: NA

Gene position: 1203539-1203682 (Clockwise)

Preceding gene: 84489855

Following gene: 84489857

Centisome position: 68.1

GC content: 32.64

Gene sequence:

>144_bases
ATGTATTGTGGAGCTTGTGCAGGTGTGTGTGTAGCTGATGCTATAGAAGTACAAGAACTTAAAATCATAATCGATGAAGA
AAAATGTACTAAATGTGGATTATGTGTAAAAACATGTCCTGTTGAAGCTTTAAAATTAGAATAG

Upstream 100 bases:

>100_bases
CGTGATGAAGCTATAGATCGTAGAAGAGAATCAGAAAAACAATTAGAAAATAAATAAATTAAATGTAGGAGTTAATATTA
TGATAGTAGAAGAATTTTGT

Downstream 100 bases:

>100_bases
GATGATATTCATGATTGAAACTGATATTTTAGTAGTTGGAGCAGGACCTTCAGGATCACTAGCAGCAAAAGAAGCAGCAT
TACATGGTGCTGATGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE

Sequences:

>Translated_47_residues
MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE
>Mature_47_residues
MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5035; Mature: 5035

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

14.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
17.0 %Cys+Met (Translated Protein)
14.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
17.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE
CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCEECCCCCEEEECC
>Mature Secondary Structure
MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE
CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA