| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489856
Identifier: 84489856
GI number: 84489856
Start: 1203539
End: 1203682
Strand: Direct
Name: 84489856
Synonym: Msp_1061
Alternate gene names: NA
Gene position: 1203539-1203682 (Clockwise)
Preceding gene: 84489855
Following gene: 84489857
Centisome position: 68.1
GC content: 32.64
Gene sequence:
>144_bases ATGTATTGTGGAGCTTGTGCAGGTGTGTGTGTAGCTGATGCTATAGAAGTACAAGAACTTAAAATCATAATCGATGAAGA AAAATGTACTAAATGTGGATTATGTGTAAAAACATGTCCTGTTGAAGCTTTAAAATTAGAATAG
Upstream 100 bases:
>100_bases CGTGATGAAGCTATAGATCGTAGAAGAGAATCAGAAAAACAATTAGAAAATAAATAAATTAAATGTAGGAGTTAATATTA TGATAGTAGAAGAATTTTGT
Downstream 100 bases:
>100_bases GATGATATTCATGATTGAAACTGATATTTTAGTAGTTGGAGCAGGACCTTCAGGATCACTAGCAGCAAAAGAAGCAGCAT TACATGGTGCTGATGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE
Sequences:
>Translated_47_residues MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE >Mature_47_residues MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5035; Mature: 5035
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 17.0 %Cys+Met (Translated Protein) 14.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 17.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCEECCCCCEEEECC >Mature Secondary Structure MYCGACAGVCVADAIEVQELKIIIDEEKCTKCGLCVKTCPVEALKLE CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA