| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489853
Identifier: 84489853
GI number: 84489853
Start: 1202435
End: 1202881
Strand: Direct
Name: 84489853
Synonym: Msp_1058
Alternate gene names: NA
Gene position: 1202435-1202881 (Clockwise)
Preceding gene: 84489852
Following gene: 84489854
Centisome position: 68.03
GC content: 25.28
Gene sequence:
>447_bases ATGAAATGTGATAGATGTAACTTTGAAAATCCAGAAAATGAATCGTACTGTATAAATTGTGGTCAGAAATTACCTGAAAA ACCAATGGTAACACATATTATTGTTAAATTTTCTAATAAAATCCCTAAAAACAATGAAAACAATAACTATTATTCTGTTA CATATAGAGGTCCTGATAATACTGAAATTAACGATACTGCATATGGATGTATTAAAAAGACCATGAAAGATAATAAGAAA TTGTTTATTGCCATTATTTTAAATTTAATTGTTGCAGGTACAGGTCATTTATATCTTAAAAGATACTATAGGGGTATAAT TTTCTTAATACTTACTATTGGTTTATGTCTTACTTCATTATATAATTCCCAATTTGTTAATTTAGTAATTAGTGCTTATG TAATACAAACAATCGATGTGATTTTTTGTTACTATGAAAGACAATGA
Upstream 100 bases:
>100_bases TTAAAATATATCCCTTAAAAATAAATACTGAATTAAAAAATAACAGTATTATTCTAAAAAAAGATAGGATTTTATCAATA AAATTCAAGGAGAGAAATAA
Downstream 100 bases:
>100_bases GTTTTTAATATAGAAATTATTATTGTATTTTAAATATATACATTATAATACAAAAAAATTAATTATTTATAAAAAATAAA TATAATATATAATTATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ
Sequences:
>Translated_148_residues MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ >Mature_148_residues MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17175; Mature: 17175
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDN CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC TEINDTAYGCIKKTMKDNKKLFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YNSQFVNLVISAYVIQTIDVIFCYYERQ HHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDN CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC TEINDTAYGCIKKTMKDNKKLFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YNSQFVNLVISAYVIQTIDVIFCYYERQ HHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA