Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489853

Identifier: 84489853

GI number: 84489853

Start: 1202435

End: 1202881

Strand: Direct

Name: 84489853

Synonym: Msp_1058

Alternate gene names: NA

Gene position: 1202435-1202881 (Clockwise)

Preceding gene: 84489852

Following gene: 84489854

Centisome position: 68.03

GC content: 25.28

Gene sequence:

>447_bases
ATGAAATGTGATAGATGTAACTTTGAAAATCCAGAAAATGAATCGTACTGTATAAATTGTGGTCAGAAATTACCTGAAAA
ACCAATGGTAACACATATTATTGTTAAATTTTCTAATAAAATCCCTAAAAACAATGAAAACAATAACTATTATTCTGTTA
CATATAGAGGTCCTGATAATACTGAAATTAACGATACTGCATATGGATGTATTAAAAAGACCATGAAAGATAATAAGAAA
TTGTTTATTGCCATTATTTTAAATTTAATTGTTGCAGGTACAGGTCATTTATATCTTAAAAGATACTATAGGGGTATAAT
TTTCTTAATACTTACTATTGGTTTATGTCTTACTTCATTATATAATTCCCAATTTGTTAATTTAGTAATTAGTGCTTATG
TAATACAAACAATCGATGTGATTTTTTGTTACTATGAAAGACAATGA

Upstream 100 bases:

>100_bases
TTAAAATATATCCCTTAAAAATAAATACTGAATTAAAAAATAACAGTATTATTCTAAAAAAAGATAGGATTTTATCAATA
AAATTCAAGGAGAGAAATAA

Downstream 100 bases:

>100_bases
GTTTTTAATATAGAAATTATTATTGTATTTTAAATATATACATTATAATACAAAAAAATTAATTATTTATAAAAAATAAA
TATAATATATAATTATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK
LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ

Sequences:

>Translated_148_residues
MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK
LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ
>Mature_148_residues
MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDNTEINDTAYGCIKKTMKDNKK
LFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSLYNSQFVNLVISAYVIQTIDVIFCYYERQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17175; Mature: 17175

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDN
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
TEINDTAYGCIKKTMKDNKKLFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNSQFVNLVISAYVIQTIDVIFCYYERQ
HHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKCDRCNFENPENESYCINCGQKLPEKPMVTHIIVKFSNKIPKNNENNNYYSVTYRGPDN
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
TEINDTAYGCIKKTMKDNKKLFIAIILNLIVAGTGHLYLKRYYRGIIFLILTIGLCLTSL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNSQFVNLVISAYVIQTIDVIFCYYERQ
HHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA