| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is paaK [H]
Identifier: 84489835
GI number: 84489835
Start: 1185928
End: 1187229
Strand: Direct
Name: paaK [H]
Synonym: Msp_1040
Alternate gene names: 84489835
Gene position: 1185928-1187229 (Clockwise)
Preceding gene: 84489834
Following gene: 84489836
Centisome position: 67.1
GC content: 32.1
Gene sequence:
>1302_bases ATGATATGGGATGAAAAGATTGAATGTATGTCTAAAGAGGACATGGAAGAATTACAACTAAAACGTTTACAAGATGTTGT TACAACAGCATATAATAAAGTACCATATTATCATAAAAGATATACCGAGAAAGAAATATACCCTGAAGATATAGAAACTC TTGCAGATATTGAAAAATTACCATTTACTACAAAAACTGATTTAAGAGAATCATATCCCTTTGGTTTATTTGCAGTAGAA CAAAAAGATATTATTGAAATCCACACATCTAGTGGAACAACAGGAAAACCTACAGTATCTGGTTATACTAAAGAAGATTT AGATATATGGGGAGAAGTTATAGCTAGGGGATTAACAATGATGGGTGTTGATGAAAATGATATAATTCAAAATACTCATG GTTATGGATTATTCACTGGTGGTTTTGGTGTTCATTATGGTGGACAGAAAGTAGGTGCAACTGTAGTACCTATATCTACA GGTCAAACATTAAGACAAATTGAAATAATGAAAGATTTCAAGACAAGTGTTTTAATATTCACACCTTCATATGGACTACA TATAGCTGAAGAACTTGATGAAATGGGAATTAAACCATCAGATTTAAATCTTAAAGTTATAGGATTTGGTTCAGAAAGTT GGACTGATGCAATGAGAAAACAAATAGAGGATAAATTCCAAATACCTGCATATAACATCTATGGACTAACAGAAGTAATG GGTCCTGGTGTAGCAATGGAATGTAGTCAACAAGATGGACTTCATCTATCAGAAGATCATTTTTATCCAGAAATTATAGA TCCACGAACATTAAAACAAGTCCCTGAAAATACACAGGGAGAATTAGTACTTACAACACTAACAAGAGTAGGTATGCCAT TAATTAGATTCCGTACAAGGGATGTTACAAAGATACACCATGAAAAATGTGGGTGTGGAAGAACACTTGTTAAAATGGAT AGAATTACTGGAAGAACAGATGATATGCTTAAAATTAAAGGAGTTAGTGTTTTCCCATCACAAATTGAAAAAGCATTATT ATCAATTGATGGTGTTGAACCACATTACCAGATTATACTTACAAGACCAGATGTTCTTGATAAAATAGAAGTTAAAGTAG AAGCTTCACCAGAAATATTCTTTGATAATGTAAAGGAATTGGTGGGAATACGTGATAAGTTAGCTCAAGCAATACATGAT GAAATAGGCCTAAGAGTTAATGTAACACTTGTTGAACCAAAAACTATTGACAGAGTAGATTCTGGAAAAGCTGTACGTGT AATTGATAATAGAAATAAATAG
Upstream 100 bases:
>100_bases ATTCTCCTTTTTAATATGAATCATTAAATAATTTAATTAAATACTTTTTACATAAATAATTAATAATTAATAATTAATAA TTTAAGGAAGTATTATATAC
Downstream 100 bases:
>100_bases GGATGTGTTAGTATGGATGATATATATGTTGATCAGTTATCAATATTTTTAGAAAATAAGGAAGGTAGAATGCTTAATAC TTTGGATATTATTGAAAATC
Product: coenzyme F390 synthetase II
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MIWDEKIECMSKEDMEELQLKRLQDVVTTAYNKVPYYHKRYTEKEIYPEDIETLADIEKLPFTTKTDLRESYPFGLFAVE QKDIIEIHTSSGTTGKPTVSGYTKEDLDIWGEVIARGLTMMGVDENDIIQNTHGYGLFTGGFGVHYGGQKVGATVVPIST GQTLRQIEIMKDFKTSVLIFTPSYGLHIAEELDEMGIKPSDLNLKVIGFGSESWTDAMRKQIEDKFQIPAYNIYGLTEVM GPGVAMECSQQDGLHLSEDHFYPEIIDPRTLKQVPENTQGELVLTTLTRVGMPLIRFRTRDVTKIHHEKCGCGRTLVKMD RITGRTDDMLKIKGVSVFPSQIEKALLSIDGVEPHYQIILTRPDVLDKIEVKVEASPEIFFDNVKELVGIRDKLAQAIHD EIGLRVNVTLVEPKTIDRVDSGKAVRVIDNRNK
Sequences:
>Translated_433_residues MIWDEKIECMSKEDMEELQLKRLQDVVTTAYNKVPYYHKRYTEKEIYPEDIETLADIEKLPFTTKTDLRESYPFGLFAVE QKDIIEIHTSSGTTGKPTVSGYTKEDLDIWGEVIARGLTMMGVDENDIIQNTHGYGLFTGGFGVHYGGQKVGATVVPIST GQTLRQIEIMKDFKTSVLIFTPSYGLHIAEELDEMGIKPSDLNLKVIGFGSESWTDAMRKQIEDKFQIPAYNIYGLTEVM GPGVAMECSQQDGLHLSEDHFYPEIIDPRTLKQVPENTQGELVLTTLTRVGMPLIRFRTRDVTKIHHEKCGCGRTLVKMD RITGRTDDMLKIKGVSVFPSQIEKALLSIDGVEPHYQIILTRPDVLDKIEVKVEASPEIFFDNVKELVGIRDKLAQAIHD EIGLRVNVTLVEPKTIDRVDSGKAVRVIDNRNK >Mature_433_residues MIWDEKIECMSKEDMEELQLKRLQDVVTTAYNKVPYYHKRYTEKEIYPEDIETLADIEKLPFTTKTDLRESYPFGLFAVE QKDIIEIHTSSGTTGKPTVSGYTKEDLDIWGEVIARGLTMMGVDENDIIQNTHGYGLFTGGFGVHYGGQKVGATVVPIST GQTLRQIEIMKDFKTSVLIFTPSYGLHIAEELDEMGIKPSDLNLKVIGFGSESWTDAMRKQIEDKFQIPAYNIYGLTEVM GPGVAMECSQQDGLHLSEDHFYPEIIDPRTLKQVPENTQGELVLTTLTRVGMPLIRFRTRDVTKIHHEKCGCGRTLVKMD RITGRTDDMLKIKGVSVFPSQIEKALLSIDGVEPHYQIILTRPDVLDKIEVKVEASPEIFFDNVKELVGIRDKLAQAIHD EIGLRVNVTLVEPKTIDRVDSGKAVRVIDNRNK
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=430, Percent_Identity=44.6511627906977, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48943; Mature: 48943
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWDEKIECMSKEDMEELQLKRLQDVVTTAYNKVPYYHKRYTEKEIYPEDIETLADIEKL CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHC PFTTKTDLRESYPFGLFAVEQKDIIEIHTSSGTTGKPTVSGYTKEDLDIWGEVIARGLTM CCCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE MGVDENDIIQNTHGYGLFTGGFGVHYGGQKVGATVVPISTGQTLRQIEIMKDFKTSVLIF ECCCCCHHHCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE TPSYGLHIAEELDEMGIKPSDLNLKVIGFGSESWTDAMRKQIEDKFQIPAYNIYGLTEVM CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCHHHHH GPGVAMECSQQDGLHLSEDHFYPEIIDPRTLKQVPENTQGELVLTTLTRVGMPLIRFRTR CCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEHHHCCCHHEEECCC DVTKIHHEKCGCGRTLVKMDRITGRTDDMLKIKGVSVFPSQIEKALLSIDGVEPHYQIIL CHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCEECHHHHHHHHHHCCCCCCCEEEEE TRPDVLDKIEVKVEASPEIFFDNVKELVGIRDKLAQAIHDEIGLRVNVTLVEPKTIDRVD ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCC SGKAVRVIDNRNK CCCEEEEECCCCC >Mature Secondary Structure MIWDEKIECMSKEDMEELQLKRLQDVVTTAYNKVPYYHKRYTEKEIYPEDIETLADIEKL CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHC PFTTKTDLRESYPFGLFAVEQKDIIEIHTSSGTTGKPTVSGYTKEDLDIWGEVIARGLTM CCCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE MGVDENDIIQNTHGYGLFTGGFGVHYGGQKVGATVVPISTGQTLRQIEIMKDFKTSVLIF ECCCCCHHHCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE TPSYGLHIAEELDEMGIKPSDLNLKVIGFGSESWTDAMRKQIEDKFQIPAYNIYGLTEVM CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCHHHHH GPGVAMECSQQDGLHLSEDHFYPEIIDPRTLKQVPENTQGELVLTTLTRVGMPLIRFRTR CCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEHHHCCCHHEEECCC DVTKIHHEKCGCGRTLVKMDRITGRTDDMLKIKGVSVFPSQIEKALLSIDGVEPHYQIIL CHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCEECHHHHHHHHHHCCCCCCCEEEEE TRPDVLDKIEVKVEASPEIFFDNVKELVGIRDKLAQAIHDEIGLRVNVTLVEPKTIDRVD ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCC SGKAVRVIDNRNK CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]