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The map label for this gene is 84489744

Identifier: 84489744

GI number: 84489744

Start: 1089388

End: 1089909

Strand: Direct

Name: 84489744

Synonym: Msp_0945

Alternate gene names: NA

Gene position: 1089388-1089909 (Clockwise)

Preceding gene: 84489743

Following gene: 84489745

Centisome position: 61.64

GC content: 22.03

Gene sequence:

>522_bases
ATGGATGAATTAAATACTGATAATATTAATGGTACCAAAATAAATTACTATTTCATATGCCCTACAAAACTTTGGTTATT
CTCACATAACATACATATGGAAAATAACTCTGAAGATGTTAAACTTGGAAAACATCTGCACGAAACAACATATAAACGAG
AAAATGAATTTTTAATTGATAATAAAATAAATATTGACTTTATCAAAATAAATCATGAAAATAATACTACGGAAATACAT
GAAATTAAAAAAAGTAAAAAAATGAAAAAAGCACATAAATATCAACTATTATACTATATGAACTACTTAAAAAAAGAGAA
AAATATTGAAAATATAAAAGGATACTTAAATTATCCAAATACTCGTGAAAAAGAAGAAGTCATACTAACAAAAACAAATG
AAGAAGAACTTGAGAAGATAATTAAAAAAATACAAGACATAATTAAACAAGAAAAACCACCTATTGTTCAAAAGAAAAAT
ATATGTTTAAAATGTGCATATTATGAACTTTGTTTCATATAA

Upstream 100 bases:

>100_bases
GAAGGTGATGCTGAATTAATAAAATTTGCTTATGATACAGGAATTGGTGAAAAAAATAGTATGGGTTTTGGAATGATTAA
AATAAAGGAAAATAAGTAAT

Downstream 100 bases:

>100_bases
AAAAAGAGGAAGAAAAAGAATGGAAAATTATTACATATTAAGTGATGGTTCTTTAACAAGACATGAAAATACTATCTACT
TCGAAAATAAAAATGGAAAA

Product: RecB family exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLIDNKINIDFIKINHENNTTEIH
EIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPNTREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKN
ICLKCAYYELCFI

Sequences:

>Translated_173_residues
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLIDNKINIDFIKINHENNTTEIH
EIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPNTREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKN
ICLKCAYYELCFI
>Mature_173_residues
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLIDNKINIDFIKINHENNTTEIH
EIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPNTREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKN
ICLKCAYYELCFI

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 20947; Mature: 20947

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLID
CCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEE
NKINIDFIKINHENNTTEIHEIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPN
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCC
TREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKNICLKCAYYELCFI
CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLID
CCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEE
NKINIDFIKINHENNTTEIHEIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPN
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCC
TREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKNICLKCAYYELCFI
CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]