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The map label for this gene is 84489659

Identifier: 84489659

GI number: 84489659

Start: 995192

End: 996043

Strand: Direct

Name: 84489659

Synonym: Msp_0859

Alternate gene names: NA

Gene position: 995192-996043 (Clockwise)

Preceding gene: 84489646

Following gene: 84489673

Centisome position: 56.31

GC content: 28.52

Gene sequence:

>852_bases
ATGATAAGAAAACCTTCTGTAGCAGGATTATTTTATGAGTCAAACAAGTCTCTTCTTGAAGAAAATATTAAAAATATATT
CAATAAAACAGGACAAAACATACCCACTACACCTTCTAATACATATAAAACAAAAGCTGCCATAGTACCTCATGCTGGAT
ATATCTATTCTGGTAAAACTGCCAGTTATGCATATGGTGATATTGCAAGAAGTGGTATTTGTGATACTGTTGTTATTATT
GGACCAAATCATACAGGTTATGGTGATGATATATCACTTACAACAAGTAACACTTGGCAAACACCCATAGGGGATGTTTG
TGTTGATAGTGAATTTAATAATGAATTAGAAAAAATAAATTCAAACATCACATTTAGTCCTGAAGCACATATAAAAGAAC
ATTCCATTGAAGTTGAATTACCATTTCTACAGTACATCTCAAATATTCAAAAGAAGTCATTTAAAATAGTTCCAATTGTA
ATTACAAGACAACAAAAGAATTTCTGTGTAGAATTAGCACATAGTATTTATGATGTTTCAAAGAAATTAAATCGTAATAT
CATGGTTGTTGCAAGTACTGATTTGACTCATTATGAAAATGCTACTAGTGCTAAGAATAAGGATGAAAAAATATTAAAAT
CAATTGAAAATATGGATATTGATTCATTATTAAATAACATAAATAAATACAACATTACAATGTGTGGATATGGGCCAACA
ATAACTGCCATTATCTATTCAAAACTAGTAAATGCTAATAGGTCAATTATATTAAATTATAGTAATAGTGGTGAGGTTTA
TAATGATTATGAATCTGTAGTAGGATATGCCTCAGCAGTAATAAAAAAATAG

Upstream 100 bases:

>100_bases
TTTAATATATATCTAAAAACTATATAATAAAGCTTACCATAATTTTATTAAAAAAAAAGTAATAACATTAAATAAGAAAA
AAATGGAAGTGAAAAATATT

Downstream 100 bases:

>100_bases
TTTCTAAAATATGTCTTTTGATAGTAAAAAAAAGAGTCTCTAAAAAAATAATAGAAGATATGATTCTTCTATTACCCAAC
AAATTTATATTTTTAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIRKPSVAGLFYESNKSLLEENIKNIFNKTGQNIPTTPSNTYKTKAAIVPHAGYIYSGKTASYAYGDIARSGICDTVVII
GPNHTGYGDDISLTTSNTWQTPIGDVCVDSEFNNELEKINSNITFSPEAHIKEHSIEVELPFLQYISNIQKKSFKIVPIV
ITRQQKNFCVELAHSIYDVSKKLNRNIMVVASTDLTHYENATSAKNKDEKILKSIENMDIDSLLNNINKYNITMCGYGPT
ITAIIYSKLVNANRSIILNYSNSGEVYNDYESVVGYASAVIKK

Sequences:

>Translated_283_residues
MIRKPSVAGLFYESNKSLLEENIKNIFNKTGQNIPTTPSNTYKTKAAIVPHAGYIYSGKTASYAYGDIARSGICDTVVII
GPNHTGYGDDISLTTSNTWQTPIGDVCVDSEFNNELEKINSNITFSPEAHIKEHSIEVELPFLQYISNIQKKSFKIVPIV
ITRQQKNFCVELAHSIYDVSKKLNRNIMVVASTDLTHYENATSAKNKDEKILKSIENMDIDSLLNNINKYNITMCGYGPT
ITAIIYSKLVNANRSIILNYSNSGEVYNDYESVVGYASAVIKK
>Mature_283_residues
MIRKPSVAGLFYESNKSLLEENIKNIFNKTGQNIPTTPSNTYKTKAAIVPHAGYIYSGKTASYAYGDIARSGICDTVVII
GPNHTGYGDDISLTTSNTWQTPIGDVCVDSEFNNELEKINSNITFSPEAHIKEHSIEVELPFLQYISNIQKKSFKIVPIV
ITRQQKNFCVELAHSIYDVSKKLNRNIMVVASTDLTHYENATSAKNKDEKILKSIENMDIDSLLNNINKYNITMCGYGPT
ITAIIYSKLVNANRSIILNYSNSGEVYNDYESVVGYASAVIKK

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=303, Percent_Identity=27.3927392739274, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI212286159, Length=227, Percent_Identity=27.3127753303965, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146594, Length=261, Percent_Identity=27.5862068965517, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI32566861, Length=261, Percent_Identity=27.5862068965517, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322467, Length=214, Percent_Identity=24.7663551401869, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357419, Length=301, Percent_Identity=24.9169435215947, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 31518; Mature: 31518

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKPSVAGLFYESNKSLLEENIKNIFNKTGQNIPTTPSNTYKTKAAIVPHAGYIYSGKT
CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEECCCC
ASYAYGDIARSGICDTVVIIGPNHTGYGDDISLTTSNTWQTPIGDVCVDSEFNNELEKIN
CCEEHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHC
SNITFSPEAHIKEHSIEVELPFLQYISNIQKKSFKIVPIVITRQQKNFCVELAHSIYDVS
CCEEECCCCCHHHCEEEEEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHHHHHH
KKLNRNIMVVASTDLTHYENATSAKNKDEKILKSIENMDIDSLLNNINKYNITMCGYGPT
HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCH
ITAIIYSKLVNANRSIILNYSNSGEVYNDYESVVGYASAVIKK
HHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRKPSVAGLFYESNKSLLEENIKNIFNKTGQNIPTTPSNTYKTKAAIVPHAGYIYSGKT
CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEECCCC
ASYAYGDIARSGICDTVVIIGPNHTGYGDDISLTTSNTWQTPIGDVCVDSEFNNELEKIN
CCEEHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHC
SNITFSPEAHIKEHSIEVELPFLQYISNIQKKSFKIVPIVITRQQKNFCVELAHSIYDVS
CCEEECCCCCHHHCEEEEEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHHHHHH
KKLNRNIMVVASTDLTHYENATSAKNKDEKILKSIENMDIDSLLNNINKYNITMCGYGPT
HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCH
ITAIIYSKLVNANRSIILNYSNSGEVYNDYESVVGYASAVIKK
HHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA