Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489604

Identifier: 84489604

GI number: 84489604

Start: 930144

End: 930881

Strand: Direct

Name: 84489604

Synonym: Msp_0800

Alternate gene names: NA

Gene position: 930144-930881 (Clockwise)

Preceding gene: 84489600

Following gene: 84489617

Centisome position: 52.63

GC content: 31.17

Gene sequence:

>738_bases
GTGAAAAAAGTGGATAAAAAAATCATAATAGCAATAGTAATAGTTGCTCTTATAGGAATAGTTGCTGCAACATACAATGC
AACAGATGATGAAAATTCTGTATTTAATCCATTATCAGGAGTTTTAACTGATGAACAAACTGTTACAGATCTAGCTGCAA
TAGAAGCTAATGGTGCAGGAAGTCCAACACAAGAAGATAACAGCAATACAGGAATAAATTCAAAAAACAATGTAGATTCC
AAAAACAATGCAAATGGAGCTAGTGGTACTACTACACAAAGTAGTAATAATAATCAAAATAATGCTAATAATGCTACCAT
AACATCTAATGGAAATAACAATCAACAACAATCAAATCCACAAAAACCAGGAACAAATACTCCTACCAATAAAACACCAA
GTAGTAATAGAACTTCACTAATATCTTCAGCACAAGCATCAGTTATTGCAAAAAATGCTGCAATTGCAGATGGATTAACT
TCTGTTACAACATCACTTTCAGAAGAAATTACAGCAAATGGTATTAAATATTATTTAATTAATGTTTATTCAAATGGTAA
ATTTATAGGATATTATGAAATAAGTTCAAAAACAGGAGAAATAACAGGTGGAGCATTTGAAGGAGAAGCACCAGACACTC
CACAAAAACCAAGTGATATACCAGACAATCTTAATGATAACAACACACCCCCATATAATCTAGTGAAAAAGTTTAACACG
ACAAATCATACAGCATAA

Upstream 100 bases:

>100_bases
TTACAAAATAAAACTTATTTTCATTAGAAAATAATAATTACCACATATTTAAATATATTAAATAAAAAATCATAATAATA
GAATAAAAAAAGAAAATGAG

Downstream 100 bases:

>100_bases
TACTATTTTTCTGAGATAAAATCTCAGAAACACTTTTTTTTATAAATATTTATTTAATCTTTTAATAGCATTATATTTTT
CTTTATTATCTATTTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS
KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT
SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT
TNHTA

Sequences:

>Translated_245_residues
MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS
KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT
SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT
TNHTA
>Mature_245_residues
MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS
KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT
SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT
TNHTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25661; Mature: 25661

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCHHHHHHHHEECCCCC
SPTQEDNSNTGINSKNNVDSKNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
QKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLTSVTTSLSEEITANGIKYYLI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT
EEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
TNHTA
CCCCC
>Mature Secondary Structure
MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCHHHHHHHHEECCCCC
SPTQEDNSNTGINSKNNVDSKNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
QKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLTSVTTSLSEEITANGIKYYLI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT
EEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
TNHTA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA