| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489604
Identifier: 84489604
GI number: 84489604
Start: 930144
End: 930881
Strand: Direct
Name: 84489604
Synonym: Msp_0800
Alternate gene names: NA
Gene position: 930144-930881 (Clockwise)
Preceding gene: 84489600
Following gene: 84489617
Centisome position: 52.63
GC content: 31.17
Gene sequence:
>738_bases GTGAAAAAAGTGGATAAAAAAATCATAATAGCAATAGTAATAGTTGCTCTTATAGGAATAGTTGCTGCAACATACAATGC AACAGATGATGAAAATTCTGTATTTAATCCATTATCAGGAGTTTTAACTGATGAACAAACTGTTACAGATCTAGCTGCAA TAGAAGCTAATGGTGCAGGAAGTCCAACACAAGAAGATAACAGCAATACAGGAATAAATTCAAAAAACAATGTAGATTCC AAAAACAATGCAAATGGAGCTAGTGGTACTACTACACAAAGTAGTAATAATAATCAAAATAATGCTAATAATGCTACCAT AACATCTAATGGAAATAACAATCAACAACAATCAAATCCACAAAAACCAGGAACAAATACTCCTACCAATAAAACACCAA GTAGTAATAGAACTTCACTAATATCTTCAGCACAAGCATCAGTTATTGCAAAAAATGCTGCAATTGCAGATGGATTAACT TCTGTTACAACATCACTTTCAGAAGAAATTACAGCAAATGGTATTAAATATTATTTAATTAATGTTTATTCAAATGGTAA ATTTATAGGATATTATGAAATAAGTTCAAAAACAGGAGAAATAACAGGTGGAGCATTTGAAGGAGAAGCACCAGACACTC CACAAAAACCAAGTGATATACCAGACAATCTTAATGATAACAACACACCCCCATATAATCTAGTGAAAAAGTTTAACACG ACAAATCATACAGCATAA
Upstream 100 bases:
>100_bases TTACAAAATAAAACTTATTTTCATTAGAAAATAATAATTACCACATATTTAAATATATTAAATAAAAAATCATAATAATA GAATAAAAAAAGAAAATGAG
Downstream 100 bases:
>100_bases TACTATTTTTCTGAGATAAAATCTCAGAAACACTTTTTTTTATAAATATTTATTTAATCTTTTAATAGCATTATATTTTT CTTTATTATCTATTTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT TNHTA
Sequences:
>Translated_245_residues MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT TNHTA >Mature_245_residues MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAGSPTQEDNSNTGINSKNNVDS KNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNPQKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLT SVTTSLSEEITANGIKYYLINVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT TNHTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25661; Mature: 25661
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCHHHHHHHHEECCCCC SPTQEDNSNTGINSKNNVDSKNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC QKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLTSVTTSLSEEITANGIKYYLI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE NVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT EEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC TNHTA CCCCC >Mature Secondary Structure MKKVDKKIIIAIVIVALIGIVAATYNATDDENSVFNPLSGVLTDEQTVTDLAAIEANGAG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHCCCCCHHHHHHHHEECCCCC SPTQEDNSNTGINSKNNVDSKNNANGASGTTTQSSNNNQNNANNATITSNGNNNQQQSNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC QKPGTNTPTNKTPSSNRTSLISSAQASVIAKNAAIADGLTSVTTSLSEEITANGIKYYLI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE NVYSNGKFIGYYEISSKTGEITGGAFEGEAPDTPQKPSDIPDNLNDNNTPPYNLVKKFNT EEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC TNHTA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA