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The map label for this gene is ttdB [C]

Identifier: 84489595

GI number: 84489595

Start: 922860

End: 923396

Strand: Direct

Name: ttdB [C]

Synonym: Msp_0791

Alternate gene names: 84489595

Gene position: 922860-923396 (Clockwise)

Preceding gene: 84489589

Following gene: 84489596

Centisome position: 52.22

GC content: 30.91

Gene sequence:

>537_bases
ATGGAATATGAATTAAATACACCATTGAATGATGAAGATATTAATAAATTAGAAGCAGGAGATACTGTTTATCTAACAGG
AAAAATTTTCACAGCAAGAGATAGTGCACATAAAAGAATAATTGATTCAGGTGCACCAATTGATTTAGAAGGAGTAGTTT
TATTCCATGCAGGACCAATAATTCGAAAAAAAGATGATGATAATTATGAAATAGTTGCTATTGGTCCAACAACAAGTATG
CGTATGAATCCATATGAACCTGAAGTTCTATCTATGGGTGTTAAAGCTATTGTTGGTAAAGGTGGTATGGATGATAATAC
ACAAAAAGCTTTAGTTGAAAATAACTGTGTATTCTTAACTGCTGTAGGTGGTTGTGCTGCATTATATGTAAATAGTATAA
AAAAGGTGGATTCTGTTAATTGGCTAGATTTAGGTATGCCTGAGGCTATTTGGGAATTAGATGTTGAATGTTTTGGACCA
TTGATTGTTACAATGGATTCTAAAGATAATAATTTATATAAAAGAAATAAAGAGTGA

Upstream 100 bases:

>100_bases
AATTTTCAATTATAATATAACAAAAGCTATTATAAGTTAAATATATAATTATATATGAATTAAATAATTTAATTTTTCTT
AAAATAAAAAAAGGGATATT

Downstream 100 bases:

>100_bases
TTATATTGAAAAATAAACTATTGTTACTGTTATTTTTTATAGCTTCAATTGTTCTTATTTCAGGATTTTTTACTTTAACT
CCAACATATATTGAAAATAA

Product: fumarate hydratase

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEYELNTPLNDEDINKLEAGDTVYLTGKIFTARDSAHKRIIDSGAPIDLEGVVLFHAGPIIRKKDDDNYEIVAIGPTTSM
RMNPYEPEVLSMGVKAIVGKGGMDDNTQKALVENNCVFLTAVGGCAALYVNSIKKVDSVNWLDLGMPEAIWELDVECFGP
LIVTMDSKDNNLYKRNKE

Sequences:

>Translated_178_residues
MEYELNTPLNDEDINKLEAGDTVYLTGKIFTARDSAHKRIIDSGAPIDLEGVVLFHAGPIIRKKDDDNYEIVAIGPTTSM
RMNPYEPEVLSMGVKAIVGKGGMDDNTQKALVENNCVFLTAVGGCAALYVNSIKKVDSVNWLDLGMPEAIWELDVECFGP
LIVTMDSKDNNLYKRNKE
>Mature_178_residues
MEYELNTPLNDEDINKLEAGDTVYLTGKIFTARDSAHKRIIDSGAPIDLEGVVLFHAGPIIRKKDDDNYEIVAIGPTTSM
RMNPYEPEVLSMGVKAIVGKGGMDDNTQKALVENNCVFLTAVGGCAALYVNSIKKVDSVNWLDLGMPEAIWELDVECFGP
LIVTMDSKDNNLYKRNKE

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=181, Percent_Identity=43.646408839779, Blast_Score=163, Evalue=7e-42,
Organism=Escherichia coli, GI1787897, Length=181, Percent_Identity=29.2817679558011, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790564, Length=184, Percent_Identity=31.5217391304348, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 19643; Mature: 19643

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYELNTPLNDEDINKLEAGDTVYLTGKIFTARDSAHKRIIDSGAPIDLEGVVLFHAGPI
CCEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCCE
IRKKDDDNYEIVAIGPTTSMRMNPYEPEVLSMGVKAIVGKGGMDDNTQKALVENNCVFLT
EECCCCCCEEEEEECCCCCEECCCCCCHHHHHCHHEEECCCCCCCCCCCCEECCCCEEEE
AVGGCAALYVNSIKKVDSVNWLDLGMPEAIWELDVECFGPLIVTMDSKDNNLYKRNKE
ECCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCHHHCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MEYELNTPLNDEDINKLEAGDTVYLTGKIFTARDSAHKRIIDSGAPIDLEGVVLFHAGPI
CCEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCCE
IRKKDDDNYEIVAIGPTTSMRMNPYEPEVLSMGVKAIVGKGGMDDNTQKALVENNCVFLT
EECCCCCCEEEEEECCCCCEECCCCCCHHHHHCHHEEECCCCCCCCCCCCEECCCCEEEE
AVGGCAALYVNSIKKVDSVNWLDLGMPEAIWELDVECFGPLIVTMDSKDNNLYKRNKE
ECCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCHHHCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]